Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Gm10268-201ENSMUST00000085340 555 ntBASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rd3Q8BRE0 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.27□□□□□ -0.12
Rd3Q8BRE0 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rd3Q8BRE0 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rd3Q8BRE0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rd3Q8BRE0 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rd3Q8BRE0 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.12
Rd3Q8BRE0 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Rd3Q8BRE0 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rd3Q8BRE0 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.27□□□□□ -0.12
Rd3Q8BRE0 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rd3Q8BRE0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.27□□□□□ -0.12
Rd3Q8BRE0 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rd3Q8BRE0 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rd3Q8BRE0 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rd3Q8BRE0 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rd3Q8BRE0 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rd3Q8BRE0 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rd3Q8BRE0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rd3Q8BRE0 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rd3Q8BRE0 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rd3Q8BRE0 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Rd3Q8BRE0 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Rd3Q8BRE0 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rd3Q8BRE0 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.27□□□□□ -0.13
Rd3Q8BRE0 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Rd3Q8BRE0 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rd3Q8BRE0 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.27□□□□□ -0.13
Rd3Q8BRE0 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
Rd3Q8BRE0 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Rd3Q8BRE0 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.27□□□□□ -0.13
Rd3Q8BRE0 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rd3Q8BRE0 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rd3Q8BRE0 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rd3Q8BRE0 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.27□□□□□ -0.13
Rd3Q8BRE0 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rd3Q8BRE0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rd3Q8BRE0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Rd3Q8BRE0 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rd3Q8BRE0 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rd3Q8BRE0 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rd3Q8BRE0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rd3Q8BRE0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Rd3Q8BRE0 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Gm16372-201ENSMUST00000073088 450 ntBASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rd3Q8BRE0 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms