Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Chmp2bQ8BJF9 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Chmp2bQ8BJF9 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Chmp2bQ8BJF9 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Chmp2bQ8BJF9 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Gm8927-201ENSMUST00000181978 981 ntBASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Gm3222-201ENSMUST00000071282 990 ntBASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp2bQ8BJF9 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Gm46209-201ENSMUST00000217912 553 ntBASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp2bQ8BJF9 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Mir449b-201ENSMUST00000104833 80 ntBASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Gm15653-201ENSMUST00000119247 907 ntBASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Chmp2bQ8BJF9 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms