Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 Gm38294-201ENSMUST00000192831 381 ntBASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc40Q8BI79 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Gm10766-202ENSMUST00000194123 606 ntBASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Gm43703-201ENSMUST00000200523 763 ntBASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Mir497b-201ENSMUST00000093601 125 ntBASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc40Q8BI79 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Gm13223-201ENSMUST00000118609 747 ntBASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc40Q8BI79 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms