Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.05□□□□□ -0.32
Rnf38Q8BI21 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf38Q8BI21 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf38Q8BI21 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf38Q8BI21 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf38Q8BI21 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf38Q8BI21 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.05□□□□□ -0.32
Rnf38Q8BI21 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Rnf38Q8BI21 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf38Q8BI21 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rnf38Q8BI21 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf38Q8BI21 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf38Q8BI21 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Gm13385-201ENSMUST00000121089 220 ntBASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Gm27622-201ENSMUST00000183779 60 ntBASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf38Q8BI21 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.03□□□□□ -0.32
Rnf38Q8BI21 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Gm22175-201ENSMUST00000175007 78 ntBASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Gm46209-201ENSMUST00000217912 553 ntBASIC13.03□□□□□ -0.32
Rnf38Q8BI21 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.03□□□□□ -0.32
Rnf38Q8BI21 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.03□□□□□ -0.32
Rnf38Q8BI21 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Syt7-205ENSMUST00000224135 1557 ntBASIC13.03□□□□□ -0.32
Rnf38Q8BI21 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.02□□□□□ -0.32
Rnf38Q8BI21 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf38Q8BI21 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf38Q8BI21 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf38Q8BI21 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Rnf38Q8BI21 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf38Q8BI21 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf38Q8BI21 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf38Q8BI21 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf38Q8BI21 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf38Q8BI21 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms