Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Atg4bQ8BGE6 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Atg4bQ8BGE6 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4bQ8BGE6 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4bQ8BGE6 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4bQ8BGE6 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4bQ8BGE6 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4bQ8BGE6 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4bQ8BGE6 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.71□□□□□ -0.37
Atg4bQ8BGE6 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4bQ8BGE6 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4bQ8BGE6 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4bQ8BGE6 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4bQ8BGE6 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.71□□□□□ -0.37
Atg4bQ8BGE6 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4bQ8BGE6 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.71□□□□□ -0.37
Atg4bQ8BGE6 Gm37917-201ENSMUST00000194711 392 ntBASIC12.71□□□□□ -0.37
Atg4bQ8BGE6 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.71□□□□□ -0.37
Atg4bQ8BGE6 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.71□□□□□ -0.37
Atg4bQ8BGE6 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Atg4bQ8BGE6 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.71□□□□□ -0.37
Atg4bQ8BGE6 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.71□□□□□ -0.37
Atg4bQ8BGE6 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.71□□□□□ -0.37
Atg4bQ8BGE6 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4bQ8BGE6 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.71□□□□□ -0.37
Atg4bQ8BGE6 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.71□□□□□ -0.37
Atg4bQ8BGE6 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4bQ8BGE6 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atg4bQ8BGE6 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atg4bQ8BGE6 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atg4bQ8BGE6 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Atg4bQ8BGE6 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Atg4bQ8BGE6 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.71□□□□□ -0.38
Atg4bQ8BGE6 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Atg4bQ8BGE6 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atg4bQ8BGE6 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Gm18624-201ENSMUST00000220966 658 ntBASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Grk6-205ENSMUST00000224653 2976 ntBASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Atg4bQ8BGE6 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.69□□□□□ -0.38
Atg4bQ8BGE6 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms