Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Gm19078-201ENSMUST00000206311 727 ntBASIC13.33□□□□□ -0.28
Ubp1Q811S7 Gm44719-201ENSMUST00000206404 149 ntBASIC13.33□□□□□ -0.28
Ubp1Q811S7 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.33□□□□□ -0.28
Ubp1Q811S7 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubp1Q811S7 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.32□□□□□ -0.28
Ubp1Q811S7 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubp1Q811S7 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubp1Q811S7 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ubp1Q811S7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.32□□□□□ -0.28
Ubp1Q811S7 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubp1Q811S7 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubp1Q811S7 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ubp1Q811S7 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubp1Q811S7 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ubp1Q811S7 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ubp1Q811S7 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.32□□□□□ -0.28
Ubp1Q811S7 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.32□□□□□ -0.28
Ubp1Q811S7 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubp1Q811S7 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.32□□□□□ -0.28
Ubp1Q811S7 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubp1Q811S7 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ubp1Q811S7 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ubp1Q811S7 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.32□□□□□ -0.28
Ubp1Q811S7 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubp1Q811S7 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubp1Q811S7 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubp1Q811S7 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Ubp1Q811S7 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubp1Q811S7 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ubp1Q811S7 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubp1Q811S7 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubp1Q811S7 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubp1Q811S7 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubp1Q811S7 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubp1Q811S7 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.31□□□□□ -0.28
Ubp1Q811S7 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubp1Q811S7 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.31□□□□□ -0.28
Ubp1Q811S7 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubp1Q811S7 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubp1Q811S7 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubp1Q811S7 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.31□□□□□ -0.28
Ubp1Q811S7 Gm23984-201ENSMUST00000157139 203 ntBASIC13.31□□□□□ -0.28
Ubp1Q811S7 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.31□□□□□ -0.28
Ubp1Q811S7 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ubp1Q811S7 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ubp1Q811S7 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.31□□□□□ -0.28
Ubp1Q811S7 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.31□□□□□ -0.28
Ubp1Q811S7 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.31□□□□□ -0.28
Ubp1Q811S7 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.31□□□□□ -0.28
Ubp1Q811S7 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.31□□□□□ -0.28
Ubp1Q811S7 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubp1Q811S7 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubp1Q811S7 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.31□□□□□ -0.28
Ubp1Q811S7 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ubp1Q811S7 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubp1Q811S7 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubp1Q811S7 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubp1Q811S7 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubp1Q811S7 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ubp1Q811S7 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ubp1Q811S7 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubp1Q811S7 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubp1Q811S7 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ubp1Q811S7 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.3□□□□□ -0.28
Ubp1Q811S7 Gm12091-201ENSMUST00000146791 830 ntBASIC13.3□□□□□ -0.28
Ubp1Q811S7 Gm26464-201ENSMUST00000157094 305 ntBASIC13.3□□□□□ -0.28
Ubp1Q811S7 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.3□□□□□ -0.28
Ubp1Q811S7 Gm7063-201ENSMUST00000186840 981 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms