Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Gm29396-201ENSMUST00000185659 716 ntBASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Gm38158-201ENSMUST00000194617 339 ntBASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Gm44069-201ENSMUST00000204898 506 ntBASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Gm18056-201ENSMUST00000207670 568 ntBASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Gm18061-201ENSMUST00000208350 562 ntBASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Gm18063-201ENSMUST00000208529 568 ntBASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Gm18052-201ENSMUST00000208750 559 ntBASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Usp6nlQ80XC3 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Gm37259-201ENSMUST00000193903 849 ntBASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Usp6nlQ80XC3 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp6nlQ80XC3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp6nlQ80XC3 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp6nlQ80XC3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp6nlQ80XC3 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp6nlQ80XC3 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Usp6nlQ80XC3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Usp6nlQ80XC3 Gm22323-201ENSMUST00000103832 109 ntBASIC14.84□□□□□ -0.03
Usp6nlQ80XC3 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp6nlQ80XC3 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp6nlQ80XC3 Gm2231-201ENSMUST00000125661 612 ntBASIC14.84□□□□□ -0.03
Usp6nlQ80XC3 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.84□□□□□ -0.03
Usp6nlQ80XC3 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.84□□□□□ -0.03
Usp6nlQ80XC3 Gm6334-201ENSMUST00000207083 228 ntBASIC14.84□□□□□ -0.03
Usp6nlQ80XC3 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.84□□□□□ -0.03
Usp6nlQ80XC3 Gm8227-201ENSMUST00000223306 571 ntBASIC14.84□□□□□ -0.03
Usp6nlQ80XC3 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.84□□□□□ -0.03
Usp6nlQ80XC3 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp6nlQ80XC3 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp6nlQ80XC3 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp6nlQ80XC3 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Usp6nlQ80XC3 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Usp6nlQ80XC3 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp6nlQ80XC3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Usp6nlQ80XC3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Usp6nlQ80XC3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Usp6nlQ80XC3 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Usp6nlQ80XC3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.83□□□□□ -0.03
Usp6nlQ80XC3 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp6nlQ80XC3 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms