Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38bQ80SY5 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Prpf38bQ80SY5 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Gm15429-201ENSMUST00000151268 798 ntBASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Gm4804-201ENSMUST00000182234 999 ntBASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Mir8109-201ENSMUST00000184375 117 ntBASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Gm10012-201ENSMUST00000078252 192 ntBASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Gm24526-201ENSMUST00000082921 158 ntBASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.14□□□□□ -0.15
Prpf38bQ80SY5 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Gm45880-201ENSMUST00000213041 853 ntBASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Gm17795-201ENSMUST00000214505 757 ntBASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38bQ80SY5 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38bQ80SY5 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms