Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.48□□□□□ -0.41
Pif1Q80SX8 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Gm5187-201ENSMUST00000117317 991 ntBASIC12.48□□□□□ -0.41
Pif1Q80SX8 Gm6152-201ENSMUST00000151704 340 ntBASIC12.48□□□□□ -0.41
Pif1Q80SX8 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.48□□□□□ -0.41
Pif1Q80SX8 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.48□□□□□ -0.41
Pif1Q80SX8 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pif1Q80SX8 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pif1Q80SX8 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pif1Q80SX8 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pif1Q80SX8 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pif1Q80SX8 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pif1Q80SX8 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Pif1Q80SX8 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Pif1Q80SX8 Gm16177-201ENSMUST00000120728 718 ntBASIC12.47□□□□□ -0.41
Pif1Q80SX8 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.47□□□□□ -0.41
Pif1Q80SX8 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pif1Q80SX8 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pif1Q80SX8 Gm8810-201ENSMUST00000172895 754 ntBASIC12.47□□□□□ -0.41
Pif1Q80SX8 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC12.47□□□□□ -0.41
Pif1Q80SX8 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pif1Q80SX8 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Pif1Q80SX8 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pif1Q80SX8 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pif1Q80SX8 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pif1Q80SX8 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pif1Q80SX8 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pif1Q80SX8 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pif1Q80SX8 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Pif1Q80SX8 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.47□□□□□ -0.41
Pif1Q80SX8 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Pif1Q80SX8 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pif1Q80SX8 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pif1Q80SX8 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pif1Q80SX8 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pif1Q80SX8 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pif1Q80SX8 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pif1Q80SX8 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Gm43179-201ENSMUST00000198797 275 ntBASIC12.46□□□□□ -0.41
Pif1Q80SX8 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pif1Q80SX8 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.46□□□□□ -0.41
Pif1Q80SX8 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pif1Q80SX8 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.46□□□□□ -0.42
Pif1Q80SX8 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pif1Q80SX8 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pif1Q80SX8 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pif1Q80SX8 Gm43636-201ENSMUST00000201501 2235 ntBASIC12.46□□□□□ -0.42
Pif1Q80SX8 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pif1Q80SX8 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.46□□□□□ -0.42
Pif1Q80SX8 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pif1Q80SX8 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms