Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Gm9176-201ENSMUST00000219955 1120 ntBASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Gm13859-201ENSMUST00000119936 1423 ntBASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Gm37008-201ENSMUST00000195712 319 ntBASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Gm3786-201ENSMUST00000202659 378 ntBASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 AC073947.2-201ENSMUST00000215888 1130 ntBASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Syne1Q6ZWR6 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Gm13385-201ENSMUST00000121089 220 ntBASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Gm29396-201ENSMUST00000185659 716 ntBASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Gm11658-201ENSMUST00000120913 1008 ntBASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Gm1335-201ENSMUST00000121653 386 ntBASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Gm2467-201ENSMUST00000182266 1010 ntBASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Gm6981-201ENSMUST00000182467 1008 ntBASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Rn7sk-201ENSMUST00000083103 331 ntBASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Gm26315-201ENSMUST00000083890 321 ntBASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Gm24447-201ENSMUST00000083977 338 ntBASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Nudt18-202ENSMUST00000228554 3619 ntBASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 AC140406.1-201ENSMUST00000226481 465 ntBASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 AC133598.1-201ENSMUST00000224327 660 ntBASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 AC134335.2-201ENSMUST00000227660 440 ntBASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Syne1Q6ZWR6 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms