Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snrnp40Q6PE01 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Gm11964-201ENSMUST00000120982 444 ntBASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Gm4768-201ENSMUST00000206199 686 ntBASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.81□□□□□ -0.52
Snrnp40Q6PE01 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Gm11222-201ENSMUST00000119005 738 ntBASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Gm12363-201ENSMUST00000122250 668 ntBASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Gm18584-201ENSMUST00000203098 964 ntBASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Gm5781-201ENSMUST00000219792 443 ntBASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Snrnp40Q6PE01 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms