Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd4Q6PDQ2 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 Gm25732-201ENSMUST00000175168 60 ntBASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 Gm38092-201ENSMUST00000195600 653 ntBASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 Gm19931-201ENSMUST00000198920 368 ntBASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 Ighv8-10-201ENSMUST00000199579 358 ntBASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 Gm8099-201ENSMUST00000200510 742 ntBASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 AC093022.1-201ENSMUST00000226949 1072 ntBASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Chd4Q6PDQ2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Gm44094-201ENSMUST00000204703 2030 ntBASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Gm2606-201ENSMUST00000100754 1002 ntBASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Gm13736-201ENSMUST00000119272 253 ntBASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Gm5950-201ENSMUST00000213337 772 ntBASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Gm7293-201ENSMUST00000216682 1007 ntBASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Gm43399-201ENSMUST00000202546 2374 ntBASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd4Q6PDQ2 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Gm11531-201ENSMUST00000117614 555 ntBASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Gm13492-201ENSMUST00000119772 665 ntBASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Gm14726-201ENSMUST00000120623 896 ntBASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 AC167013.1-201ENSMUST00000228592 202 ntBASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Gm8862-201ENSMUST00000198379 1346 ntBASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Gm3096-201ENSMUST00000185770 364 ntBASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Gm37201-201ENSMUST00000191845 523 ntBASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Gm18615-201ENSMUST00000222919 1031 ntBASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 AC154595.3-201ENSMUST00000224579 384 ntBASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 CT030182.1-201ENSMUST00000225935 533 ntBASIC17.25■□□□□ 0.35
Chd4Q6PDQ2 Mir433-201ENSMUST00000093564 124 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms