Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smarcd3Q6P9Z1 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Gm6415-201ENSMUST00000118488 348 ntBASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Gm28630-201ENSMUST00000187806 498 ntBASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Gm7774-201ENSMUST00000200064 533 ntBASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcd3Q6P9Z1 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Gm8410-201ENSMUST00000117225 605 ntBASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.37□□□□□ -0.43
Smarcd3Q6P9Z1 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcd3Q6P9Z1 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms