Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Slx4Q6P1D7 Daam2-202ENSMUST00000224595 1926 ntBASIC20.36■□□□□ 0.85
Slx4Q6P1D7 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slx4Q6P1D7 Crry-ps-201ENSMUST00000079090 1309 ntBASIC20.36■□□□□ 0.85
Slx4Q6P1D7 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slx4Q6P1D7 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slx4Q6P1D7 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slx4Q6P1D7 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Slx4Q6P1D7 Gm21451-201ENSMUST00000111062 2775 ntBASIC20.36■□□□□ 0.85
Slx4Q6P1D7 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Slx4Q6P1D7 Gm13996-201ENSMUST00000118456 430 ntBASIC20.36■□□□□ 0.85
Slx4Q6P1D7 Gm38092-201ENSMUST00000195600 653 ntBASIC20.36■□□□□ 0.85
Slx4Q6P1D7 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC20.36■□□□□ 0.85
Slx4Q6P1D7 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC20.36■□□□□ 0.85
Slx4Q6P1D7 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Slx4Q6P1D7 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slx4Q6P1D7 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slx4Q6P1D7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slx4Q6P1D7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Slx4Q6P1D7 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
Slx4Q6P1D7 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slx4Q6P1D7 Gm3287-205ENSMUST00000228893 1332 ntBASIC20.35■□□□□ 0.85
Slx4Q6P1D7 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slx4Q6P1D7 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slx4Q6P1D7 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slx4Q6P1D7 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slx4Q6P1D7 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Slx4Q6P1D7 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slx4Q6P1D7 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Slx4Q6P1D7 Gm24749-201ENSMUST00000157838 343 ntBASIC20.35■□□□□ 0.85
Slx4Q6P1D7 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Slx4Q6P1D7 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC20.35■□□□□ 0.85
Slx4Q6P1D7 AU022133-201ENSMUST00000200601 873 ntBASIC20.35■□□□□ 0.85
Slx4Q6P1D7 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC20.35■□□□□ 0.85
Slx4Q6P1D7 D9Wsu149-201ENSMUST00000214169 594 ntBASIC20.35■□□□□ 0.85
Slx4Q6P1D7 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Slx4Q6P1D7 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slx4Q6P1D7 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Slx4Q6P1D7 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Slx4Q6P1D7 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slx4Q6P1D7 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slx4Q6P1D7 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slx4Q6P1D7 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slx4Q6P1D7 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC20.35■□□□□ 0.85
Slx4Q6P1D7 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Gm6161-201ENSMUST00000121942 1102 ntBASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Gm6254-201ENSMUST00000168178 1072 ntBASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Gm6153-201ENSMUST00000172004 1058 ntBASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Slx4Q6P1D7 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Gm5641-202ENSMUST00000198699 1080 ntBASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Gm45691-201ENSMUST00000206905 1120 ntBASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Gm44545-201ENSMUST00000208262 746 ntBASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC20.34■□□□□ 0.85
Slx4Q6P1D7 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC20.34■□□□□ 0.85
Slx4Q6P1D7 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Slx4Q6P1D7 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Gm27552-201ENSMUST00000183351 62 ntBASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Gm27844-201ENSMUST00000183613 62 ntBASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Gm44126-201ENSMUST00000204831 514 ntBASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Slx4Q6P1D7 AC135669.1-202ENSMUST00000216742 540 ntBASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Gm22058-201ENSMUST00000083393 310 ntBASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Slx4Q6P1D7 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slx4Q6P1D7 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Slx4Q6P1D7 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Slx4Q6P1D7 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Slx4Q6P1D7 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slx4Q6P1D7 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Slx4Q6P1D7 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slx4Q6P1D7 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slx4Q6P1D7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slx4Q6P1D7 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slx4Q6P1D7 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC20.33■□□□□ 0.84
Slx4Q6P1D7 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Slx4Q6P1D7 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slx4Q6P1D7 Gm13492-201ENSMUST00000119772 665 ntBASIC20.33■□□□□ 0.84
Slx4Q6P1D7 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slx4Q6P1D7 Gm18734-201ENSMUST00000172937 808 ntBASIC20.33■□□□□ 0.84
Slx4Q6P1D7 Gm37666-201ENSMUST00000194110 866 ntBASIC20.33■□□□□ 0.84
Slx4Q6P1D7 Gm7003-201ENSMUST00000195089 312 ntBASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms