Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trim27Q62158 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Trim27Q62158 Gm16342-201ENSMUST00000124025 1025 ntBASIC16.55■□□□□ 0.24
Trim27Q62158 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.55■□□□□ 0.24
Trim27Q62158 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC16.55■□□□□ 0.24
Trim27Q62158 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.55■□□□□ 0.24
Trim27Q62158 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC16.55■□□□□ 0.24
Trim27Q62158 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trim27Q62158 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Trim27Q62158 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 Gm5939-201ENSMUST00000119613 2874 ntBASIC16.55■□□□□ 0.24
Trim27Q62158 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Trim27Q62158 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim27Q62158 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim27Q62158 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim27Q62158 AC122314.1-201ENSMUST00000223056 2239 ntBASIC16.54■□□□□ 0.24
Trim27Q62158 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim27Q62158 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim27Q62158 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.54■□□□□ 0.24
Trim27Q62158 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trim27Q62158 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trim27Q62158 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trim27Q62158 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim27Q62158 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim27Q62158 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.54■□□□□ 0.24
Trim27Q62158 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim27Q62158 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim27Q62158 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trim27Q62158 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.54■□□□□ 0.24
Trim27Q62158 Gm42550-201ENSMUST00000201553 960 ntBASIC16.54■□□□□ 0.24
Trim27Q62158 Gm18041-201ENSMUST00000218210 618 ntBASIC16.54■□□□□ 0.24
Trim27Q62158 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.54■□□□□ 0.24
Trim27Q62158 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trim27Q62158 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim27Q62158 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim27Q62158 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Trim27Q62158 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim27Q62158 Gm5466-201ENSMUST00000119395 1890 ntBASIC16.54■□□□□ 0.24
Trim27Q62158 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim27Q62158 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim27Q62158 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trim27Q62158 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim27Q62158 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim27Q62158 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim27Q62158 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim27Q62158 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim27Q62158 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim27Q62158 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim27Q62158 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.53■□□□□ 0.24
Trim27Q62158 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.53■□□□□ 0.24
Trim27Q62158 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC16.53■□□□□ 0.24
Trim27Q62158 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim27Q62158 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim27Q62158 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim27Q62158 Gm18307-201ENSMUST00000206864 949 ntBASIC16.53■□□□□ 0.24
Trim27Q62158 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.53■□□□□ 0.24
Trim27Q62158 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim27Q62158 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim27Q62158 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim27Q62158 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim27Q62158 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim27Q62158 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim27Q62158 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim27Q62158 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim27Q62158 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim27Q62158 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim27Q62158 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim27Q62158 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim27Q62158 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim27Q62158 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC16.52■□□□□ 0.24
Trim27Q62158 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim27Q62158 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC16.52■□□□□ 0.24
Trim27Q62158 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Trim27Q62158 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim27Q62158 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trim27Q62158 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim27Q62158 Gm37644-201ENSMUST00000192190 2270 ntBASIC16.52■□□□□ 0.24
Trim27Q62158 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim27Q62158 Gm38094-201ENSMUST00000195864 2978 ntBASIC16.52■□□□□ 0.24
Trim27Q62158 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim27Q62158 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim27Q62158 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim27Q62158 Gm11400-201ENSMUST00000120853 1214 ntBASIC16.52■□□□□ 0.24
Trim27Q62158 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.52■□□□□ 0.24
Trim27Q62158 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms