Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SspnQ62147 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SspnQ62147 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
SspnQ62147 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.32□□□□□ -0.6
SspnQ62147 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
SspnQ62147 Gm15393-201ENSMUST00000120499 219 ntBASIC11.32□□□□□ -0.6
SspnQ62147 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.32□□□□□ -0.6
SspnQ62147 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.32□□□□□ -0.6
SspnQ62147 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.32□□□□□ -0.6
SspnQ62147 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.32□□□□□ -0.6
SspnQ62147 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SspnQ62147 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SspnQ62147 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.32□□□□□ -0.6
SspnQ62147 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.32□□□□□ -0.6
SspnQ62147 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SspnQ62147 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.32□□□□□ -0.6
SspnQ62147 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SspnQ62147 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Grk6-205ENSMUST00000224653 2976 ntBASIC11.31□□□□□ -0.6
SspnQ62147 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.31□□□□□ -0.6
SspnQ62147 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SspnQ62147 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SspnQ62147 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Mir698-201ENSMUST00000102164 109 ntBASIC11.31□□□□□ -0.6
SspnQ62147 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SspnQ62147 Gm17837-201ENSMUST00000186435 985 ntBASIC11.31□□□□□ -0.6
SspnQ62147 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.31□□□□□ -0.6
SspnQ62147 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.31□□□□□ -0.6
SspnQ62147 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.31□□□□□ -0.6
SspnQ62147 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.31□□□□□ -0.6
SspnQ62147 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
SspnQ62147 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SspnQ62147 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SspnQ62147 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
SspnQ62147 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.31□□□□□ -0.6
SspnQ62147 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SspnQ62147 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SspnQ62147 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms