Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gli3Q61602 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gli3Q61602 Gm7551-201ENSMUST00000089593 1074 ntBASIC17.7■□□□□ 0.42
Gli3Q61602 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gli3Q61602 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gli3Q61602 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gli3Q61602 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gli3Q61602 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gli3Q61602 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gli3Q61602 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gli3Q61602 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gli3Q61602 Gm6161-201ENSMUST00000121942 1102 ntBASIC17.69■□□□□ 0.42
Gli3Q61602 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gli3Q61602 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Gli3Q61602 Gm6153-201ENSMUST00000172004 1058 ntBASIC17.69■□□□□ 0.42
Gli3Q61602 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Gli3Q61602 Gm5641-202ENSMUST00000198699 1080 ntBASIC17.69■□□□□ 0.42
Gli3Q61602 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC17.69■□□□□ 0.42
Gli3Q61602 Gm45909-201ENSMUST00000212413 1031 ntBASIC17.69■□□□□ 0.42
Gli3Q61602 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Gli3Q61602 Gm19994-201ENSMUST00000217086 586 ntBASIC17.69■□□□□ 0.42
Gli3Q61602 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gli3Q61602 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gli3Q61602 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gli3Q61602 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gli3Q61602 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gli3Q61602 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Gli3Q61602 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gli3Q61602 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Gli3Q61602 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gli3Q61602 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gli3Q61602 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gli3Q61602 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gli3Q61602 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gli3Q61602 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gli3Q61602 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gli3Q61602 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gli3Q61602 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gli3Q61602 Gm14999-201ENSMUST00000121039 624 ntBASIC17.68■□□□□ 0.42
Gli3Q61602 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC17.68■□□□□ 0.42
Gli3Q61602 Gm19091-201ENSMUST00000208120 978 ntBASIC17.68■□□□□ 0.42
Gli3Q61602 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gli3Q61602 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gli3Q61602 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC17.68■□□□□ 0.42
Gli3Q61602 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gli3Q61602 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gli3Q61602 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Gli3Q61602 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gli3Q61602 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gli3Q61602 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gli3Q61602 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gli3Q61602 AC158355.1-201ENSMUST00000215895 1705 ntBASIC17.68■□□□□ 0.42
Gli3Q61602 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Gli3Q61602 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gli3Q61602 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gli3Q61602 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gli3Q61602 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gli3Q61602 Gm5852-201ENSMUST00000194119 1021 ntBASIC17.67■□□□□ 0.42
Gli3Q61602 Gm5542-201ENSMUST00000195485 1089 ntBASIC17.67■□□□□ 0.42
Gli3Q61602 Gm18038-201ENSMUST00000197900 485 ntBASIC17.67■□□□□ 0.42
Gli3Q61602 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gli3Q61602 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Gli3Q61602 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Gli3Q61602 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gli3Q61602 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gli3Q61602 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gli3Q61602 AC130671.2-201ENSMUST00000227224 1621 ntBASIC17.67■□□□□ 0.42
Gli3Q61602 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gli3Q61602 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gli3Q61602 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gli3Q61602 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gli3Q61602 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Gli3Q61602 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gli3Q61602 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gli3Q61602 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gli3Q61602 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC17.66■□□□□ 0.42
Gli3Q61602 Gm11980-201ENSMUST00000121445 986 ntBASIC17.66■□□□□ 0.42
Gli3Q61602 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gli3Q61602 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Gli3Q61602 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC17.66■□□□□ 0.42
Gli3Q61602 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gli3Q61602 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC17.66■□□□□ 0.42
Gli3Q61602 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gli3Q61602 Gm43962-201ENSMUST00000203898 190 ntBASIC17.66■□□□□ 0.42
Gli3Q61602 Mirlet7i-201ENSMUST00000083472 85 ntBASIC17.66■□□□□ 0.42
Gli3Q61602 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gli3Q61602 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gli3Q61602 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gli3Q61602 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gli3Q61602 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Gli3Q61602 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Gli3Q61602 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Gli3Q61602 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gli3Q61602 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Gli3Q61602 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gli3Q61602 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gli3Q61602 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gli3Q61602 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Gli3Q61602 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gli3Q61602 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms