Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcd1Q61466 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcd1Q61466 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.02□□□□□ -0.16
Smarcd1Q61466 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Smarcd1Q61466 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcd1Q61466 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcd1Q61466 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcd1Q61466 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Smarcd1Q61466 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcd1Q61466 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcd1Q61466 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Smarcd1Q61466 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcd1Q61466 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Smarcd1Q61466 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.02□□□□□ -0.17
Smarcd1Q61466 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.02□□□□□ -0.17
Smarcd1Q61466 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd1Q61466 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd1Q61466 Gm27847-201ENSMUST00000183711 107 ntBASIC14.02□□□□□ -0.17
Smarcd1Q61466 Gm27375-201ENSMUST00000183799 107 ntBASIC14.02□□□□□ -0.17
Smarcd1Q61466 Gm6266-201ENSMUST00000203844 806 ntBASIC14.02□□□□□ -0.17
Smarcd1Q61466 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Smarcd1Q61466 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.02□□□□□ -0.17
Smarcd1Q61466 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.02□□□□□ -0.17
Smarcd1Q61466 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd1Q61466 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd1Q61466 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd1Q61466 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd1Q61466 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.02□□□□□ -0.17
Smarcd1Q61466 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Smarcd1Q61466 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Smarcd1Q61466 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd1Q61466 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd1Q61466 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd1Q61466 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Smarcd1Q61466 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd1Q61466 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Smarcd1Q61466 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.02□□□□□ -0.17
Smarcd1Q61466 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcd1Q61466 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Gm8213-201ENSMUST00000118191 441 ntBASIC14.01□□□□□ -0.17
Smarcd1Q61466 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Gm11803-201ENSMUST00000119966 444 ntBASIC14.01□□□□□ -0.17
Smarcd1Q61466 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.01□□□□□ -0.17
Smarcd1Q61466 Proscos-202ENSMUST00000178990 666 ntBASIC14.01□□□□□ -0.17
Smarcd1Q61466 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcd1Q61466 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.01□□□□□ -0.17
Smarcd1Q61466 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.01□□□□□ -0.17
Smarcd1Q61466 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd1Q61466 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd1Q61466 Gm15544-201ENSMUST00000118776 1531 ntBASIC14□□□□□ -0.17
Smarcd1Q61466 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd1Q61466 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd1Q61466 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd1Q61466 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Smarcd1Q61466 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd1Q61466 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd1Q61466 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcd1Q61466 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd1Q61466 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcd1Q61466 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcd1Q61466 Gm12390-201ENSMUST00000117897 397 ntBASIC14□□□□□ -0.17
Smarcd1Q61466 Gm14127-201ENSMUST00000117906 678 ntBASIC14□□□□□ -0.17
Smarcd1Q61466 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms