Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm15770-201ENSMUST00000117498 584 ntBASIC14.94□□□□□ -0.02
Ift88Q61371 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.94□□□□□ -0.02
Ift88Q61371 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.94□□□□□ -0.02
Ift88Q61371 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Ift88Q61371 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.94□□□□□ -0.02
Ift88Q61371 Gm5425-201ENSMUST00000214125 459 ntBASIC14.94□□□□□ -0.02
Ift88Q61371 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Ift88Q61371 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ift88Q61371 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.94□□□□□ -0.02
Ift88Q61371 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ift88Q61371 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ift88Q61371 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ift88Q61371 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ift88Q61371 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ift88Q61371 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ift88Q61371 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ift88Q61371 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ift88Q61371 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ift88Q61371 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ift88Q61371 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ift88Q61371 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ift88Q61371 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ift88Q61371 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.93□□□□□ -0.02
Ift88Q61371 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Ift88Q61371 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ift88Q61371 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ift88Q61371 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ift88Q61371 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ift88Q61371 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ift88Q61371 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.93□□□□□ -0.02
Ift88Q61371 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.93□□□□□ -0.02
Ift88Q61371 Gm12585-201ENSMUST00000117307 290 ntBASIC14.93□□□□□ -0.02
Ift88Q61371 Gm15678-201ENSMUST00000117573 960 ntBASIC14.93□□□□□ -0.02
Ift88Q61371 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.93□□□□□ -0.02
Ift88Q61371 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.93□□□□□ -0.02
Ift88Q61371 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ift88Q61371 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Ift88Q61371 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ift88Q61371 Gm25144-201ENSMUST00000179561 110 ntBASIC14.93□□□□□ -0.02
Ift88Q61371 Gm25352-201ENSMUST00000179815 110 ntBASIC14.93□□□□□ -0.02
Ift88Q61371 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ift88Q61371 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.93□□□□□ -0.02
Ift88Q61371 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.93□□□□□ -0.02
Ift88Q61371 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ift88Q61371 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ift88Q61371 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ift88Q61371 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ift88Q61371 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ift88Q61371 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.93□□□□□ -0.02
Ift88Q61371 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ift88Q61371 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ift88Q61371 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ift88Q61371 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ift88Q61371 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ift88Q61371 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ift88Q61371 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ift88Q61371 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ift88Q61371 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ift88Q61371 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.92□□□□□ -0.02
Ift88Q61371 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.92□□□□□ -0.02
Ift88Q61371 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ift88Q61371 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.92□□□□□ -0.02
Ift88Q61371 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Ift88Q61371 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.92□□□□□ -0.02
Ift88Q61371 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ift88Q61371 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ift88Q61371 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.92□□□□□ -0.02
Ift88Q61371 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ift88Q61371 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.92□□□□□ -0.02
Ift88Q61371 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ift88Q61371 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ift88Q61371 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ift88Q61371 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ift88Q61371 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ift88Q61371 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.92□□□□□ -0.02
Ift88Q61371 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.92□□□□□ -0.02
Ift88Q61371 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ift88Q61371 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ift88Q61371 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ift88Q61371 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ift88Q61371 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ift88Q61371 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ift88Q61371 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ift88Q61371 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ift88Q61371 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.91□□□□□ -0.02
Ift88Q61371 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ift88Q61371 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ift88Q61371 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ift88Q61371 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ift88Q61371 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ift88Q61371 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ift88Q61371 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ift88Q61371 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Ift88Q61371 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ift88Q61371 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.91□□□□□ -0.02
Ift88Q61371 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ift88Q61371 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.91□□□□□ -0.02
Ift88Q61371 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ift88Q61371 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ift88Q61371 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms