Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Gm2824-203ENSMUST00000226189 1228 ntBASIC16.15■□□□□ 0.18
NfkbibQ60778 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NfkbibQ60778 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NfkbibQ60778 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NfkbibQ60778 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NfkbibQ60778 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NfkbibQ60778 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NfkbibQ60778 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NfkbibQ60778 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NfkbibQ60778 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NfkbibQ60778 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
NfkbibQ60778 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NfkbibQ60778 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NfkbibQ60778 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NfkbibQ60778 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NfkbibQ60778 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
NfkbibQ60778 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NfkbibQ60778 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC16.14■□□□□ 0.17
NfkbibQ60778 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC16.14■□□□□ 0.17
NfkbibQ60778 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NfkbibQ60778 Gm4271-201ENSMUST00000174444 973 ntBASIC16.14■□□□□ 0.17
NfkbibQ60778 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC16.14■□□□□ 0.17
NfkbibQ60778 Gm45784-201ENSMUST00000188360 142 ntBASIC16.14■□□□□ 0.17
NfkbibQ60778 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC16.14■□□□□ 0.17
NfkbibQ60778 Gm9299-201ENSMUST00000206392 1140 ntBASIC16.14■□□□□ 0.17
NfkbibQ60778 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.14■□□□□ 0.17
NfkbibQ60778 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC16.14■□□□□ 0.17
NfkbibQ60778 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.14■□□□□ 0.17
NfkbibQ60778 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NfkbibQ60778 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NfkbibQ60778 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NfkbibQ60778 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NfkbibQ60778 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.14■□□□□ 0.17
NfkbibQ60778 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NfkbibQ60778 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NfkbibQ60778 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC16.14■□□□□ 0.17
NfkbibQ60778 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NfkbibQ60778 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NfkbibQ60778 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NfkbibQ60778 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.14■□□□□ 0.17
NfkbibQ60778 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NfkbibQ60778 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NfkbibQ60778 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NfkbibQ60778 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NfkbibQ60778 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.13■□□□□ 0.17
NfkbibQ60778 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NfkbibQ60778 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
NfkbibQ60778 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.13■□□□□ 0.17
NfkbibQ60778 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NfkbibQ60778 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NfkbibQ60778 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NfkbibQ60778 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC16.13■□□□□ 0.17
NfkbibQ60778 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NfkbibQ60778 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NfkbibQ60778 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NfkbibQ60778 Gm16202-201ENSMUST00000117532 544 ntBASIC16.13■□□□□ 0.17
NfkbibQ60778 Gm6161-201ENSMUST00000121942 1102 ntBASIC16.13■□□□□ 0.17
NfkbibQ60778 Gm13123-201ENSMUST00000122173 492 ntBASIC16.13■□□□□ 0.17
NfkbibQ60778 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NfkbibQ60778 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
NfkbibQ60778 Gm6254-201ENSMUST00000168178 1072 ntBASIC16.13■□□□□ 0.17
NfkbibQ60778 Gm6153-201ENSMUST00000172004 1058 ntBASIC16.13■□□□□ 0.17
NfkbibQ60778 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
NfkbibQ60778 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NfkbibQ60778 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
NfkbibQ60778 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC16.13■□□□□ 0.17
NfkbibQ60778 Gm5641-202ENSMUST00000198699 1080 ntBASIC16.13■□□□□ 0.17
NfkbibQ60778 Gm44985-201ENSMUST00000206202 1016 ntBASIC16.13■□□□□ 0.17
NfkbibQ60778 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
NfkbibQ60778 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
NfkbibQ60778 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NfkbibQ60778 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NfkbibQ60778 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NfkbibQ60778 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
NfkbibQ60778 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
NfkbibQ60778 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NfkbibQ60778 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NfkbibQ60778 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NfkbibQ60778 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NfkbibQ60778 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NfkbibQ60778 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NfkbibQ60778 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC16.13■□□□□ 0.17
NfkbibQ60778 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NfkbibQ60778 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NfkbibQ60778 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
NfkbibQ60778 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.12■□□□□ 0.17
NfkbibQ60778 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NfkbibQ60778 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NfkbibQ60778 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NfkbibQ60778 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NfkbibQ60778 Gm7553-201ENSMUST00000185805 1426 ntBASIC16.12■□□□□ 0.17
NfkbibQ60778 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.12■□□□□ 0.17
NfkbibQ60778 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
NfkbibQ60778 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NfkbibQ60778 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
NfkbibQ60778 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.12■□□□□ 0.17
NfkbibQ60778 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NfkbibQ60778 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.12■□□□□ 0.17
NfkbibQ60778 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NfkbibQ60778 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms