Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Gm15593-201ENSMUST00000122085 1008 ntBASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.11□□□□□ -0.79
Trav3-3Q5R1C3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Gm5366-201ENSMUST00000215494 1338 ntBASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Gm6376-201ENSMUST00000209407 580 ntBASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-3Q5R1C3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms