Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 Gm9358-201ENSMUST00000183067 927 ntBASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 Gm8894-201ENSMUST00000074642 666 ntBASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vps13aQ5H8C4 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps13aQ5H8C4 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vps13aQ5H8C4 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps13aQ5H8C4 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps13aQ5H8C4 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps13aQ5H8C4 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
Vps13aQ5H8C4 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
Vps13aQ5H8C4 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vps13aQ5H8C4 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.02□□□□□ -0.32
Vps13aQ5H8C4 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.32
Vps13aQ5H8C4 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps13aQ5H8C4 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps13aQ5H8C4 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps13aQ5H8C4 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vps13aQ5H8C4 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vps13aQ5H8C4 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vps13aQ5H8C4 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Gm19287-201ENSMUST00000203190 358 ntBASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Gm13296-201ENSMUST00000117854 997 ntBASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Gm15547-201ENSMUST00000122152 333 ntBASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Gm22121-201ENSMUST00000175148 54 ntBASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Gm44552-201ENSMUST00000205458 1247 ntBASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps13aQ5H8C4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Gm23153-201ENSMUST00000175323 313 ntBASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Vps13aQ5H8C4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms