Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Gm13886-201ENSMUST00000117876 1183 ntBASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Gm11524-201ENSMUST00000119349 807 ntBASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Gm18041-201ENSMUST00000218210 618 ntBASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 AC155298.2-201ENSMUST00000225485 6226 ntBASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf20Q5DTM8 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.05■□□□□ 0.16
Rnf20Q5DTM8 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf20Q5DTM8 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf20Q5DTM8 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf20Q5DTM8 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.05■□□□□ 0.16
Rnf20Q5DTM8 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Rnf20Q5DTM8 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf20Q5DTM8 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.05■□□□□ 0.16
Rnf20Q5DTM8 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.05■□□□□ 0.16
Rnf20Q5DTM8 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rnf20Q5DTM8 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC16.05■□□□□ 0.16
Rnf20Q5DTM8 Gm19078-201ENSMUST00000206311 727 ntBASIC16.05■□□□□ 0.16
Rnf20Q5DTM8 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf20Q5DTM8 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Rnf20Q5DTM8 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf20Q5DTM8 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf20Q5DTM8 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf20Q5DTM8 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf20Q5DTM8 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf20Q5DTM8 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.05■□□□□ 0.16
Rnf20Q5DTM8 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Rnf20Q5DTM8 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Gm16215-201ENSMUST00000161990 637 ntBASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Gm5354-201ENSMUST00000182417 973 ntBASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf20Q5DTM8 Gm9924-202ENSMUST00000192760 2311 ntBASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms