Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Gm6218-201ENSMUST00000219812 628 ntBASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 AC155298.2-201ENSMUST00000225485 6226 ntBASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Gm21038-201ENSMUST00000222205 1383 ntBASIC15.62■□□□□ 0.09
Cdkl5Q3UTQ8 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Syt7-205ENSMUST00000224135 1557 ntBASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
Cdkl5Q3UTQ8 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Mir874-201ENSMUST00000104769 76 ntBASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Gm15678-201ENSMUST00000117573 960 ntBASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Gm27437-201ENSMUST00000183429 107 ntBASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdkl5Q3UTQ8 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkl5Q3UTQ8 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms