Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col5a2Q3U962 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col5a2Q3U962 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Col5a2Q3U962 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col5a2Q3U962 Gm11628-201ENSMUST00000117568 171 ntBASIC15.78■□□□□ 0.12
Col5a2Q3U962 Gm3096-201ENSMUST00000185770 364 ntBASIC15.78■□□□□ 0.12
Col5a2Q3U962 Gm8099-201ENSMUST00000200510 742 ntBASIC15.78■□□□□ 0.12
Col5a2Q3U962 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col5a2Q3U962 Gm8285-201ENSMUST00000208293 759 ntBASIC15.78■□□□□ 0.12
Col5a2Q3U962 Gm18393-201ENSMUST00000208349 1131 ntBASIC15.78■□□□□ 0.12
Col5a2Q3U962 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.78■□□□□ 0.12
Col5a2Q3U962 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col5a2Q3U962 Gm8385-201ENSMUST00000058999 643 ntBASIC15.78■□□□□ 0.12
Col5a2Q3U962 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Col5a2Q3U962 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col5a2Q3U962 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col5a2Q3U962 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col5a2Q3U962 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Col5a2Q3U962 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col5a2Q3U962 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.77■□□□□ 0.12
Col5a2Q3U962 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col5a2Q3U962 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Col5a2Q3U962 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col5a2Q3U962 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Col5a2Q3U962 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.77■□□□□ 0.12
Col5a2Q3U962 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.77■□□□□ 0.12
Col5a2Q3U962 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Col5a2Q3U962 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Col5a2Q3U962 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col5a2Q3U962 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col5a2Q3U962 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col5a2Q3U962 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC15.77■□□□□ 0.11
Col5a2Q3U962 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.77■□□□□ 0.11
Col5a2Q3U962 Gm25043-201ENSMUST00000158604 212 ntBASIC15.77■□□□□ 0.11
Col5a2Q3U962 Gm26361-201ENSMUST00000158868 186 ntBASIC15.77■□□□□ 0.11
Col5a2Q3U962 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col5a2Q3U962 Gm17208-201ENSMUST00000168388 535 ntBASIC15.77■□□□□ 0.11
Col5a2Q3U962 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC15.77■□□□□ 0.11
Col5a2Q3U962 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC15.77■□□□□ 0.11
Col5a2Q3U962 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC15.77■□□□□ 0.11
Col5a2Q3U962 Gm8712-201ENSMUST00000221090 701 ntBASIC15.77■□□□□ 0.11
Col5a2Q3U962 AC161537.1-201ENSMUST00000226199 1015 ntBASIC15.77■□□□□ 0.11
Col5a2Q3U962 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col5a2Q3U962 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col5a2Q3U962 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.77■□□□□ 0.11
Col5a2Q3U962 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col5a2Q3U962 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Col5a2Q3U962 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col5a2Q3U962 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col5a2Q3U962 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col5a2Q3U962 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col5a2Q3U962 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Col5a2Q3U962 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col5a2Q3U962 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col5a2Q3U962 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col5a2Q3U962 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col5a2Q3U962 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col5a2Q3U962 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col5a2Q3U962 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col5a2Q3U962 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col5a2Q3U962 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col5a2Q3U962 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
Col5a2Q3U962 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col5a2Q3U962 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col5a2Q3U962 Gm6335-201ENSMUST00000118081 1194 ntBASIC15.76■□□□□ 0.11
Col5a2Q3U962 Gm13996-201ENSMUST00000118456 430 ntBASIC15.76■□□□□ 0.11
Col5a2Q3U962 Gm7816-201ENSMUST00000119884 1194 ntBASIC15.76■□□□□ 0.11
Col5a2Q3U962 Gm15542-201ENSMUST00000121585 1194 ntBASIC15.76■□□□□ 0.11
Col5a2Q3U962 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col5a2Q3U962 Ighv5-7-201ENSMUST00000192302 244 ntBASIC15.76■□□□□ 0.11
Col5a2Q3U962 D9Wsu149-201ENSMUST00000214169 594 ntBASIC15.76■□□□□ 0.11
Col5a2Q3U962 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC15.76■□□□□ 0.11
Col5a2Q3U962 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col5a2Q3U962 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col5a2Q3U962 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col5a2Q3U962 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col5a2Q3U962 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Col5a2Q3U962 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col5a2Q3U962 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col5a2Q3U962 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Col5a2Q3U962 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Col5a2Q3U962 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col5a2Q3U962 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col5a2Q3U962 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col5a2Q3U962 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col5a2Q3U962 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col5a2Q3U962 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Col5a2Q3U962 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col5a2Q3U962 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col5a2Q3U962 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.75■□□□□ 0.11
Col5a2Q3U962 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col5a2Q3U962 Gm8913-201ENSMUST00000209491 641 ntBASIC15.75■□□□□ 0.11
Col5a2Q3U962 CT025694.1-201ENSMUST00000226188 934 ntBASIC15.75■□□□□ 0.11
Col5a2Q3U962 AC123665.1-201ENSMUST00000228204 438 ntBASIC15.75■□□□□ 0.11
Col5a2Q3U962 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col5a2Q3U962 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col5a2Q3U962 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.75■□□□□ 0.11
Col5a2Q3U962 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col5a2Q3U962 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.75■□□□□ 0.11
Col5a2Q3U962 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms