Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.52□□□□□ -0.57
Fndc4Q3TR08 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Fndc4Q3TR08 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Fndc4Q3TR08 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Fndc4Q3TR08 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Gm9719-201ENSMUST00000162765 543 ntBASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Gm27631-201ENSMUST00000184163 466 ntBASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.51□□□□□ -0.57
Fndc4Q3TR08 AA619741-201ENSMUST00000195095 646 ntBASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Gm44608-201ENSMUST00000206827 855 ntBASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.51□□□□□ -0.57
Fndc4Q3TR08 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Fndc4Q3TR08 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Gm5566-201ENSMUST00000116118 459 ntBASIC11.5□□□□□ -0.57
Fndc4Q3TR08 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Gm25948-201ENSMUST00000175334 112 ntBASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Gm27430-201ENSMUST00000184585 107 ntBASIC11.5□□□□□ -0.57
Fndc4Q3TR08 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Gm44333-201ENSMUST00000197168 107 ntBASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Gm45453-201ENSMUST00000211758 853 ntBASIC11.5□□□□□ -0.57
Fndc4Q3TR08 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Fndc4Q3TR08 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms