Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cul4aQ3TCH7 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Gm27430-201ENSMUST00000184585 107 ntBASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Gm27772-201ENSMUST00000184900 187 ntBASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Gm44333-201ENSMUST00000197168 107 ntBASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Gm17330-201ENSMUST00000221047 165 ntBASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Gm6888-201ENSMUST00000221983 706 ntBASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cul4aQ3TCH7 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.16□□□□□ -0.14
Cul4aQ3TCH7 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cul4aQ3TCH7 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cul4aQ3TCH7 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cul4aQ3TCH7 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cul4aQ3TCH7 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.16□□□□□ -0.14
Cul4aQ3TCH7 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.16□□□□□ -0.14
Cul4aQ3TCH7 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cul4aQ3TCH7 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cul4aQ3TCH7 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.16□□□□□ -0.14
Cul4aQ3TCH7 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cul4aQ3TCH7 Gm7775-201ENSMUST00000218871 853 ntBASIC14.16□□□□□ -0.14
Cul4aQ3TCH7 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cul4aQ3TCH7 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cul4aQ3TCH7 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Cul4aQ3TCH7 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cul4aQ3TCH7 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cul4aQ3TCH7 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cul4aQ3TCH7 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.16□□□□□ -0.14
Cul4aQ3TCH7 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Cul4aQ3TCH7 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cul4aQ3TCH7 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cul4aQ3TCH7 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Mir874-201ENSMUST00000104769 76 ntBASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cul4aQ3TCH7 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms