Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Q3KNL4 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Q3KNL4 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3KNL4 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3KNL4 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3KNL4 Gm13385-201ENSMUST00000121089 220 ntBASIC13.26□□□□□ -0.29
Q3KNL4 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3KNL4 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Q3KNL4 Gm26308-201ENSMUST00000157768 69 ntBASIC13.26□□□□□ -0.29
Q3KNL4 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3KNL4 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Q3KNL4 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3KNL4 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.26□□□□□ -0.29
Q3KNL4 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3KNL4 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Q3KNL4 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Q3KNL4 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3KNL4 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3KNL4 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3KNL4 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Q3KNL4 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Q3KNL4 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Q3KNL4 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3KNL4 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Q3KNL4 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Q3KNL4 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.26□□□□□ -0.29
Q3KNL4 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Q3KNL4 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Q3KNL4 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.25□□□□□ -0.29
Q3KNL4 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Q3KNL4 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3KNL4 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3KNL4 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3KNL4 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3KNL4 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3KNL4 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Q3KNL4 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3KNL4 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3KNL4 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3KNL4 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3KNL4 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3KNL4 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Q3KNL4 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Q3KNL4 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Q3KNL4 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.25□□□□□ -0.29
Q3KNL4 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3KNL4 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.25□□□□□ -0.29
Q3KNL4 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.25□□□□□ -0.29
Q3KNL4 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3KNL4 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Q3KNL4 Gm14701-201ENSMUST00000117156 348 ntBASIC13.25□□□□□ -0.29
Q3KNL4 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Q3KNL4 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3KNL4 Gm25948-201ENSMUST00000175334 112 ntBASIC13.25□□□□□ -0.29
Q3KNL4 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.25□□□□□ -0.29
Q3KNL4 Gm5425-201ENSMUST00000214125 459 ntBASIC13.25□□□□□ -0.29
Q3KNL4 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Q3KNL4 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.25□□□□□ -0.29
Q3KNL4 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Q3KNL4 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Q3KNL4 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3KNL4 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3KNL4 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Q3KNL4 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Q3KNL4 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.25□□□□□ -0.29
Q3KNL4 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3KNL4 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3KNL4 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.24□□□□□ -0.29
Q3KNL4 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3KNL4 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Q3KNL4 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3KNL4 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Q3KNL4 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3KNL4 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.24□□□□□ -0.29
Q3KNL4 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3KNL4 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Q3KNL4 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Q3KNL4 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.24□□□□□ -0.29
Q3KNL4 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3KNL4 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3KNL4 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3KNL4 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3KNL4 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.24□□□□□ -0.29
Q3KNL4 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Q3KNL4 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.24□□□□□ -0.29
Q3KNL4 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Q3KNL4 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.24□□□□□ -0.29
Q3KNL4 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.24□□□□□ -0.29
Q3KNL4 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3KNL4 Gm8396-201ENSMUST00000057361 823 ntBASIC13.24□□□□□ -0.29
Q3KNL4 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3KNL4 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3KNL4 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.24□□□□□ -0.29
Q3KNL4 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.24□□□□□ -0.29
Q3KNL4 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3KNL4 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.24□□□□□ -0.29
Q3KNL4 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3KNL4 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Q3KNL4 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Q3KNL4 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms