Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Gm12663-201ENSMUST00000118481 958 ntBASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 AC122408.1-201ENSMUST00000218949 218 ntBASIC6.93□□□□□ -1.3
Ush2AQ2QI47 AC136376.2-201ENSMUST00000228819 490 ntBASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Gm43072-201ENSMUST00000200283 1671 ntBASIC6.92□□□□□ -1.3
Ush2AQ2QI47 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Gm25226-201ENSMUST00000158198 123 ntBASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Gm18801-201ENSMUST00000186616 536 ntBASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Gm18514-201ENSMUST00000218980 436 ntBASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Gm4081-201ENSMUST00000195287 1838 ntBASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Gm12020-201ENSMUST00000119030 2042 ntBASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Gm13445-201ENSMUST00000121664 307 ntBASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Gm16167-201ENSMUST00000160428 1065 ntBASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Gm17944-201ENSMUST00000186351 643 ntBASIC6.92□□□□□ -1.3
Ush2AQ2QI47 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Gm18210-201ENSMUST00000209001 1524 ntBASIC6.92□□□□□ -1.3
Ush2AQ2QI47 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Gm14213-201ENSMUST00000119778 768 ntBASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Gm9081-201ENSMUST00000182346 991 ntBASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Gm9022-201ENSMUST00000182482 992 ntBASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Gm2474-201ENSMUST00000195162 559 ntBASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Gm4157-201ENSMUST00000211647 679 ntBASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Gm5507-201ENSMUST00000091897 1008 ntBASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Gm11544-201ENSMUST00000120215 382 ntBASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC6.92□□□□□ -1.3
Ush2AQ2QI47 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Gm12030-201ENSMUST00000121917 223 ntBASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Gm9116-201ENSMUST00000192400 1018 ntBASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Gm7183-201ENSMUST00000213870 1005 ntBASIC6.91□□□□□ -1.3
Ush2AQ2QI47 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms