Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.92□□□□□ -0.34
Hoxc4Q08624 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Gm8805-201ENSMUST00000117848 313 ntBASIC12.91□□□□□ -0.34
Hoxc4Q08624 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.91□□□□□ -0.34
Hoxc4Q08624 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.91□□□□□ -0.34
Hoxc4Q08624 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.91□□□□□ -0.34
Hoxc4Q08624 Gm7029-201ENSMUST00000173226 450 ntBASIC12.91□□□□□ -0.34
Hoxc4Q08624 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Gm42693-201ENSMUST00000196779 631 ntBASIC12.91□□□□□ -0.34
Hoxc4Q08624 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.91□□□□□ -0.34
Hoxc4Q08624 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Gm19309-201ENSMUST00000218295 205 ntBASIC12.91□□□□□ -0.34
Hoxc4Q08624 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.91□□□□□ -0.34
Hoxc4Q08624 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.91□□□□□ -0.34
Hoxc4Q08624 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hoxc4Q08624 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.9□□□□□ -0.34
Hoxc4Q08624 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.9□□□□□ -0.34
Hoxc4Q08624 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hoxc4Q08624 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Hoxc4Q08624 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Hoxc4Q08624 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc4Q08624 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc4Q08624 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Hoxc4Q08624 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc4Q08624 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.89□□□□□ -0.35
Hoxc4Q08624 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc4Q08624 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc4Q08624 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc4Q08624 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc4Q08624 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc4Q08624 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hoxc4Q08624 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms