Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC9.65□□□□□ -0.86
Hspg2Q05793 Gm12058-201ENSMUST00000118614 437 ntBASIC9.65□□□□□ -0.86
Hspg2Q05793 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hspg2Q05793 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hspg2Q05793 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Hspg2Q05793 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Hspg2Q05793 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.87
Hspg2Q05793 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Hspg2Q05793 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Hspg2Q05793 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Hspg2Q05793 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Hspg2Q05793 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Hspg2Q05793 Gm12165-201ENSMUST00000117047 342 ntBASIC9.65□□□□□ -0.87
Hspg2Q05793 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC9.65□□□□□ -0.87
Hspg2Q05793 Gm8584-201ENSMUST00000171982 758 ntBASIC9.65□□□□□ -0.87
Hspg2Q05793 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Hspg2Q05793 Gm5070-201ENSMUST00000177599 862 ntBASIC9.65□□□□□ -0.87
Hspg2Q05793 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Hspg2Q05793 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC9.65□□□□□ -0.87
Hspg2Q05793 Gm43908-201ENSMUST00000205074 1472 ntBASIC9.65□□□□□ -0.87
Hspg2Q05793 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Hspg2Q05793 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Hspg2Q05793 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hspg2Q05793 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hspg2Q05793 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC9.64□□□□□ -0.87
Hspg2Q05793 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hspg2Q05793 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hspg2Q05793 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Hspg2Q05793 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hspg2Q05793 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC9.64□□□□□ -0.87
Hspg2Q05793 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hspg2Q05793 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hspg2Q05793 Gm12015-201ENSMUST00000117065 843 ntBASIC9.64□□□□□ -0.87
Hspg2Q05793 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hspg2Q05793 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Hspg2Q05793 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Hspg2Q05793 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hspg2Q05793 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hspg2Q05793 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Hspg2Q05793 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC9.64□□□□□ -0.87
Hspg2Q05793 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hspg2Q05793 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hspg2Q05793 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hspg2Q05793 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hspg2Q05793 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Hspg2Q05793 AC169511.2-201ENSMUST00000226674 2063 ntBASIC9.64□□□□□ -0.87
Hspg2Q05793 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hspg2Q05793 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hspg2Q05793 Gm15515-201ENSMUST00000117827 822 ntBASIC9.64□□□□□ -0.87
Hspg2Q05793 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hspg2Q05793 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
Hspg2Q05793 Gm23218-201ENSMUST00000158124 276 ntBASIC9.64□□□□□ -0.87
Hspg2Q05793 AC173210.1-201ENSMUST00000222341 1131 ntBASIC9.64□□□□□ -0.87
Hspg2Q05793 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Hspg2Q05793 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hspg2Q05793 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hspg2Q05793 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hspg2Q05793 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hspg2Q05793 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hspg2Q05793 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hspg2Q05793 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Hspg2Q05793 Gm42863-201ENSMUST00000197875 2958 ntBASIC9.64□□□□□ -0.87
Hspg2Q05793 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hspg2Q05793 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC9.64□□□□□ -0.87
Hspg2Q05793 Gm12795-201ENSMUST00000117594 539 ntBASIC9.64□□□□□ -0.87
Hspg2Q05793 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hspg2Q05793 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC9.64□□□□□ -0.87
Hspg2Q05793 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC9.64□□□□□ -0.87
Hspg2Q05793 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hspg2Q05793 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Hspg2Q05793 Gm8325-201ENSMUST00000099086 453 ntBASIC9.64□□□□□ -0.87
Hspg2Q05793 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hspg2Q05793 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hspg2Q05793 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Hspg2Q05793 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hspg2Q05793 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hspg2Q05793 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Hspg2Q05793 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hspg2Q05793 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Hspg2Q05793 Gm15131-201ENSMUST00000119124 595 ntBASIC9.63□□□□□ -0.87
Hspg2Q05793 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC9.63□□□□□ -0.87
Hspg2Q05793 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC9.63□□□□□ -0.87
Hspg2Q05793 Rn7s6-201ENSMUST00000175005 291 ntBASIC9.63□□□□□ -0.87
Hspg2Q05793 Gm19166-201ENSMUST00000196041 1063 ntBASIC9.63□□□□□ -0.87
Hspg2Q05793 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Hspg2Q05793 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC9.63□□□□□ -0.87
Hspg2Q05793 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hspg2Q05793 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hspg2Q05793 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hspg2Q05793 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Hspg2Q05793 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hspg2Q05793 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hspg2Q05793 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hspg2Q05793 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Hspg2Q05793 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC9.63□□□□□ -0.87
Hspg2Q05793 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hspg2Q05793 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC9.63□□□□□ -0.87
Hspg2Q05793 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hspg2Q05793 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hspg2Q05793 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms