Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.29□□□□□ -0.28
Col9a1Q05722 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.29□□□□□ -0.28
Col9a1Q05722 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Col9a1Q05722 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 Gm19680-201ENSMUST00000095050 1513 ntBASIC13.29□□□□□ -0.28
Col9a1Q05722 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a1Q05722 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Col9a1Q05722 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Col9a1Q05722 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC13.28□□□□□ -0.28
Col9a1Q05722 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC13.28□□□□□ -0.28
Col9a1Q05722 Gm12507-201ENSMUST00000119155 415 ntBASIC13.28□□□□□ -0.28
Col9a1Q05722 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC13.28□□□□□ -0.28
Col9a1Q05722 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.28□□□□□ -0.28
Col9a1Q05722 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.28□□□□□ -0.28
Col9a1Q05722 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Col9a1Q05722 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Col9a1Q05722 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Gm18734-201ENSMUST00000172937 808 ntBASIC13.28□□□□□ -0.28
Col9a1Q05722 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.28□□□□□ -0.28
Col9a1Q05722 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.28□□□□□ -0.28
Col9a1Q05722 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Col9a1Q05722 Gm3793-201ENSMUST00000204973 672 ntBASIC13.28□□□□□ -0.28
Col9a1Q05722 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.28□□□□□ -0.28
Col9a1Q05722 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13.28□□□□□ -0.28
Col9a1Q05722 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.28□□□□□ -0.28
Col9a1Q05722 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Col9a1Q05722 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.28□□□□□ -0.28
Col9a1Q05722 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.28□□□□□ -0.28
Col9a1Q05722 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a1Q05722 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Col9a1Q05722 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Col9a1Q05722 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col9a1Q05722 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col9a1Q05722 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col9a1Q05722 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col9a1Q05722 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col9a1Q05722 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.27□□□□□ -0.28
Col9a1Q05722 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.27□□□□□ -0.28
Col9a1Q05722 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a1Q05722 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Col9a1Q05722 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a1Q05722 Gm13316-201ENSMUST00000140537 691 ntBASIC13.27□□□□□ -0.29
Col9a1Q05722 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.27□□□□□ -0.29
Col9a1Q05722 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.27□□□□□ -0.29
Col9a1Q05722 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Col9a1Q05722 Gm19253-201ENSMUST00000204279 307 ntBASIC13.27□□□□□ -0.29
Col9a1Q05722 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.27□□□□□ -0.29
Col9a1Q05722 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC13.27□□□□□ -0.29
Col9a1Q05722 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a1Q05722 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a1Q05722 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a1Q05722 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.27□□□□□ -0.29
Col9a1Q05722 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a1Q05722 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.27□□□□□ -0.29
Col9a1Q05722 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a1Q05722 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a1Q05722 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a1Q05722 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.27□□□□□ -0.29
Col9a1Q05722 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a1Q05722 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a1Q05722 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a1Q05722 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a1Q05722 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a1Q05722 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col9a1Q05722 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms