Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm37835-201ENSMUST00000193305 361 ntBASIC13.89□□□□□ -0.19
Sox9Q04887 Gm38317-201ENSMUST00000195564 343 ntBASIC13.89□□□□□ -0.19
Sox9Q04887 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 Gm18584-201ENSMUST00000203098 964 ntBASIC13.89□□□□□ -0.19
Sox9Q04887 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.89□□□□□ -0.19
Sox9Q04887 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Sox9Q04887 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Sox9Q04887 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.89□□□□□ -0.19
Sox9Q04887 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sox9Q04887 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.89□□□□□ -0.19
Sox9Q04887 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.89□□□□□ -0.19
Sox9Q04887 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Sox9Q04887 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox9Q04887 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox9Q04887 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.88□□□□□ -0.19
Sox9Q04887 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox9Q04887 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox9Q04887 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox9Q04887 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox9Q04887 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox9Q04887 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox9Q04887 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sox9Q04887 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sox9Q04887 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.88□□□□□ -0.19
Sox9Q04887 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox9Q04887 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox9Q04887 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox9Q04887 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.88□□□□□ -0.19
Sox9Q04887 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sox9Q04887 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Sox9Q04887 Gm9083-201ENSMUST00000120423 819 ntBASIC13.88□□□□□ -0.19
Sox9Q04887 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.88□□□□□ -0.19
Sox9Q04887 Gm12403-201ENSMUST00000121384 959 ntBASIC13.88□□□□□ -0.19
Sox9Q04887 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.88□□□□□ -0.19
Sox9Q04887 Gm15276-201ENSMUST00000145953 498 ntBASIC13.88□□□□□ -0.19
Sox9Q04887 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox9Q04887 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.88□□□□□ -0.19
Sox9Q04887 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.88□□□□□ -0.19
Sox9Q04887 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.88□□□□□ -0.19
Sox9Q04887 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox9Q04887 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.88□□□□□ -0.19
Sox9Q04887 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox9Q04887 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sox9Q04887 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox9Q04887 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sox9Q04887 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox9Q04887 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox9Q04887 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox9Q04887 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox9Q04887 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.88□□□□□ -0.19
Sox9Q04887 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox9Q04887 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox9Q04887 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.88□□□□□ -0.19
Sox9Q04887 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.88□□□□□ -0.19
Sox9Q04887 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox9Q04887 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox9Q04887 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox9Q04887 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox9Q04887 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.88□□□□□ -0.19
Sox9Q04887 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox9Q04887 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox9Q04887 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox9Q04887 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox9Q04887 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox9Q04887 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox9Q04887 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox9Q04887 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox9Q04887 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox9Q04887 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox9Q04887 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Sox9Q04887 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox9Q04887 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.87□□□□□ -0.19
Sox9Q04887 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.87□□□□□ -0.19
Sox9Q04887 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox9Q04887 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.87□□□□□ -0.19
Sox9Q04887 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox9Q04887 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox9Q04887 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox9Q04887 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox9Q04887 Gm25732-201ENSMUST00000175168 60 ntBASIC13.87□□□□□ -0.19
Sox9Q04887 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Sox9Q04887 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox9Q04887 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.87□□□□□ -0.19
Sox9Q04887 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.87□□□□□ -0.19
Sox9Q04887 Gm19163-201ENSMUST00000223313 780 ntBASIC13.87□□□□□ -0.19
Sox9Q04887 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.87□□□□□ -0.19
Sox9Q04887 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox9Q04887 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms