Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Scn1bP97952 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Scn1bP97952 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 Gm2272-201ENSMUST00000194903 582 ntBASIC12.31□□□□□ -0.44
Scn1bP97952 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.31□□□□□ -0.44
Scn1bP97952 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Scn1bP97952 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1bP97952 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1bP97952 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1bP97952 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1bP97952 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1bP97952 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1bP97952 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1bP97952 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1bP97952 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1bP97952 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Scn1bP97952 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.3□□□□□ -0.44
Scn1bP97952 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.3□□□□□ -0.44
Scn1bP97952 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1bP97952 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1bP97952 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Scn1bP97952 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1bP97952 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Scn1bP97952 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Scn1bP97952 Gm16198-201ENSMUST00000118766 670 ntBASIC12.3□□□□□ -0.44
Scn1bP97952 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.3□□□□□ -0.44
Scn1bP97952 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Scn1bP97952 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1bP97952 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Scn1bP97952 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.3□□□□□ -0.44
Scn1bP97952 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.3□□□□□ -0.44
Scn1bP97952 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.3□□□□□ -0.44
Scn1bP97952 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1bP97952 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Scn1bP97952 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Scn1bP97952 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.3□□□□□ -0.44
Scn1bP97952 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1bP97952 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1bP97952 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1bP97952 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1bP97952 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1bP97952 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Scn1bP97952 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1bP97952 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1bP97952 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1bP97952 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1bP97952 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1bP97952 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1bP97952 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1bP97952 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1bP97952 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1bP97952 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1bP97952 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1bP97952 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1bP97952 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Scn1bP97952 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1bP97952 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1bP97952 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.29□□□□□ -0.44
Scn1bP97952 Gm14140-201ENSMUST00000119999 995 ntBASIC12.29□□□□□ -0.44
Scn1bP97952 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1bP97952 Gm16026-204ENSMUST00000162652 683 ntBASIC12.29□□□□□ -0.44
Scn1bP97952 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1bP97952 Gm27301-201ENSMUST00000184012 127 ntBASIC12.29□□□□□ -0.44
Scn1bP97952 Thap2-203ENSMUST00000218989 527 ntBASIC12.29□□□□□ -0.44
Scn1bP97952 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.29□□□□□ -0.44
Scn1bP97952 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1bP97952 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1bP97952 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1bP97952 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Scn1bP97952 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1bP97952 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1bP97952 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1bP97952 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.29□□□□□ -0.44
Scn1bP97952 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1bP97952 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1bP97952 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn1bP97952 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Scn1bP97952 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms