Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.55□□□□□ -0.56
Smn1P97801 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Smn1P97801 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Smn1P97801 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.55□□□□□ -0.56
Smn1P97801 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.55□□□□□ -0.56
Smn1P97801 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Smn1P97801 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smn1P97801 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smn1P97801 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Smn1P97801 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smn1P97801 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Smn1P97801 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smn1P97801 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Smn1P97801 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smn1P97801 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smn1P97801 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.55□□□□□ -0.56
Smn1P97801 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Smn1P97801 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.55□□□□□ -0.56
Smn1P97801 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smn1P97801 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.55□□□□□ -0.56
Smn1P97801 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.55□□□□□ -0.56
Smn1P97801 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smn1P97801 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smn1P97801 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smn1P97801 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.55□□□□□ -0.56
Smn1P97801 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Smn1P97801 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.54□□□□□ -0.56
Smn1P97801 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.54□□□□□ -0.56
Smn1P97801 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Gm9719-201ENSMUST00000162765 543 ntBASIC11.54□□□□□ -0.56
Smn1P97801 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Gm9824-201ENSMUST00000178707 561 ntBASIC11.54□□□□□ -0.56
Smn1P97801 Gm18766-201ENSMUST00000189811 808 ntBASIC11.54□□□□□ -0.56
Smn1P97801 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.54□□□□□ -0.56
Smn1P97801 Dupd1-202ENSMUST00000224735 548 ntBASIC11.54□□□□□ -0.56
Smn1P97801 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.54□□□□□ -0.56
Smn1P97801 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Smn1P97801 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Smn1P97801 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Smn1P97801 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.54□□□□□ -0.56
Smn1P97801 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smn1P97801 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smn1P97801 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smn1P97801 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smn1P97801 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Smn1P97801 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Smn1P97801 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Smn1P97801 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smn1P97801 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smn1P97801 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smn1P97801 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smn1P97801 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smn1P97801 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smn1P97801 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smn1P97801 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smn1P97801 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smn1P97801 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smn1P97801 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.53□□□□□ -0.56
Smn1P97801 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smn1P97801 Gm5566-201ENSMUST00000116118 459 ntBASIC11.53□□□□□ -0.56
Smn1P97801 Gm14494-201ENSMUST00000118786 435 ntBASIC11.53□□□□□ -0.56
Smn1P97801 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 186.4 ms