Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd3P97770 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Thumpd3P97770 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd3P97770 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd3P97770 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Thumpd3P97770 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd3P97770 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd3P97770 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Thumpd3P97770 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd3P97770 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd3P97770 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd3P97770 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.74□□□□□ -0.21
Thumpd3P97770 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd3P97770 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd3P97770 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd3P97770 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.74□□□□□ -0.21
Thumpd3P97770 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.74□□□□□ -0.21
Thumpd3P97770 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.74□□□□□ -0.21
Thumpd3P97770 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Thumpd3P97770 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.74□□□□□ -0.21
Thumpd3P97770 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.74□□□□□ -0.21
Thumpd3P97770 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.74□□□□□ -0.21
Thumpd3P97770 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.74□□□□□ -0.21
Thumpd3P97770 Gm18041-201ENSMUST00000218210 618 ntBASIC13.74□□□□□ -0.21
Thumpd3P97770 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd3P97770 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd3P97770 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd3P97770 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd3P97770 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd3P97770 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.74□□□□□ -0.21
Thumpd3P97770 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd3P97770 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd3P97770 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd3P97770 BC001981-202ENSMUST00000191393 1545 ntBASIC13.74□□□□□ -0.21
Thumpd3P97770 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Thumpd3P97770 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd3P97770 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd3P97770 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd3P97770 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Thumpd3P97770 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Thumpd3P97770 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd3P97770 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd3P97770 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd3P97770 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd3P97770 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.73□□□□□ -0.21
Thumpd3P97770 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd3P97770 Gm6222-201ENSMUST00000120787 396 ntBASIC13.73□□□□□ -0.21
Thumpd3P97770 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.73□□□□□ -0.21
Thumpd3P97770 Gm27680-201ENSMUST00000184192 160 ntBASIC13.73□□□□□ -0.21
Thumpd3P97770 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Thumpd3P97770 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd3P97770 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd3P97770 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.73□□□□□ -0.21
Thumpd3P97770 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.73□□□□□ -0.21
Thumpd3P97770 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd3P97770 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd3P97770 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Thumpd3P97770 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.73□□□□□ -0.21
Thumpd3P97770 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd3P97770 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Thumpd3P97770 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd3P97770 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Thumpd3P97770 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd3P97770 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd3P97770 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd3P97770 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd3P97770 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Thumpd3P97770 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd3P97770 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.73□□□□□ -0.21
Thumpd3P97770 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd3P97770 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd3P97770 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd3P97770 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd3P97770 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd3P97770 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd3P97770 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd3P97770 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd3P97770 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Thumpd3P97770 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.72□□□□□ -0.21
Thumpd3P97770 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd3P97770 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.72□□□□□ -0.21
Thumpd3P97770 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.72□□□□□ -0.21
Thumpd3P97770 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.72□□□□□ -0.21
Thumpd3P97770 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.72□□□□□ -0.21
Thumpd3P97770 Gm15487-201ENSMUST00000122373 465 ntBASIC13.72□□□□□ -0.21
Thumpd3P97770 Mir1897-201ENSMUST00000122581 272 ntBASIC13.72□□□□□ -0.21
Thumpd3P97770 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd3P97770 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd3P97770 Gm29741-201ENSMUST00000192667 421 ntBASIC13.72□□□□□ -0.21
Thumpd3P97770 AA619741-201ENSMUST00000195095 646 ntBASIC13.72□□□□□ -0.21
Thumpd3P97770 Gm7775-201ENSMUST00000218871 853 ntBASIC13.72□□□□□ -0.21
Thumpd3P97770 Shd-206ENSMUST00000225145 998 ntBASIC13.72□□□□□ -0.21
Thumpd3P97770 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd3P97770 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd3P97770 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd3P97770 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd3P97770 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd3P97770 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd3P97770 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd3P97770 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms