Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc1P97496 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc1P97496 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc1P97496 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc1P97496 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc1P97496 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc1P97496 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc1P97496 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc1P97496 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Smarcc1P97496 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc1P97496 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc1P97496 Gm11222-201ENSMUST00000119005 738 ntBASIC16.8■□□□□ 0.28
Smarcc1P97496 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC16.8■□□□□ 0.28
Smarcc1P97496 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Smarcc1P97496 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc1P97496 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC16.8■□□□□ 0.28
Smarcc1P97496 Gm43138-201ENSMUST00000199123 708 ntBASIC16.8■□□□□ 0.28
Smarcc1P97496 Gm4768-201ENSMUST00000206199 686 ntBASIC16.8■□□□□ 0.28
Smarcc1P97496 Gm5781-201ENSMUST00000219792 443 ntBASIC16.8■□□□□ 0.28
Smarcc1P97496 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc1P97496 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC16.8■□□□□ 0.28
Smarcc1P97496 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Smarcc1P97496 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc1P97496 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.8■□□□□ 0.28
Smarcc1P97496 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc1P97496 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc1P97496 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc1P97496 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc1P97496 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc1P97496 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.8■□□□□ 0.28
Smarcc1P97496 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc1P97496 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc1P97496 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Smarcc1P97496 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc1P97496 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.79■□□□□ 0.28
Smarcc1P97496 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc1P97496 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc1P97496 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Smarcc1P97496 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc1P97496 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc1P97496 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC16.79■□□□□ 0.28
Smarcc1P97496 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Smarcc1P97496 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc1P97496 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc1P97496 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc1P97496 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc1P97496 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc1P97496 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC16.79■□□□□ 0.28
Smarcc1P97496 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc1P97496 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC16.79■□□□□ 0.28
Smarcc1P97496 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC16.79■□□□□ 0.28
Smarcc1P97496 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC16.79■□□□□ 0.28
Smarcc1P97496 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Smarcc1P97496 Gm18584-201ENSMUST00000203098 964 ntBASIC16.79■□□□□ 0.28
Smarcc1P97496 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc1P97496 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc1P97496 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC16.79■□□□□ 0.28
Smarcc1P97496 Gm6015-201ENSMUST00000217493 1586 ntBASIC16.79■□□□□ 0.28
Smarcc1P97496 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc1P97496 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC16.79■□□□□ 0.28
Smarcc1P97496 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc1P97496 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc1P97496 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Smarcc1P97496 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc1P97496 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc1P97496 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Smarcc1P97496 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smarcc1P97496 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc1P97496 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc1P97496 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc1P97496 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc1P97496 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc1P97496 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc1P97496 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Smarcc1P97496 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc1P97496 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.78■□□□□ 0.28
Smarcc1P97496 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc1P97496 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc1P97496 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Smarcc1P97496 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc1P97496 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc1P97496 Gm24548-201ENSMUST00000158650 108 ntBASIC16.78■□□□□ 0.28
Smarcc1P97496 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC16.78■□□□□ 0.28
Smarcc1P97496 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC16.78■□□□□ 0.28
Smarcc1P97496 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc1P97496 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Smarcc1P97496 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Smarcc1P97496 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc1P97496 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc1P97496 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Smarcc1P97496 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc1P97496 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Smarcc1P97496 Gm43289-201ENSMUST00000200537 1475 ntBASIC16.78■□□□□ 0.28
Smarcc1P97496 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC16.78■□□□□ 0.28
Smarcc1P97496 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
Smarcc1P97496 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc1P97496 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc1P97496 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Smarcc1P97496 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcc1P97496 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms