Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lig3P97386 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Lig3P97386 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lig3P97386 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lig3P97386 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Lig3P97386 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lig3P97386 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lig3P97386 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lig3P97386 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lig3P97386 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lig3P97386 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lig3P97386 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lig3P97386 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Lig3P97386 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Lig3P97386 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lig3P97386 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lig3P97386 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lig3P97386 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Lig3P97386 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lig3P97386 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lig3P97386 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.75□□□□□ -0.05
Lig3P97386 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Lig3P97386 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lig3P97386 Gm13464-201ENSMUST00000119418 935 ntBASIC14.75□□□□□ -0.05
Lig3P97386 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.75□□□□□ -0.05
Lig3P97386 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.75□□□□□ -0.05
Lig3P97386 Gm18307-201ENSMUST00000206864 949 ntBASIC14.75□□□□□ -0.05
Lig3P97386 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lig3P97386 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lig3P97386 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lig3P97386 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lig3P97386 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Lig3P97386 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lig3P97386 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lig3P97386 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lig3P97386 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lig3P97386 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Lig3P97386 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.75□□□□□ -0.05
Lig3P97386 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.75□□□□□ -0.05
Lig3P97386 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lig3P97386 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lig3P97386 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lig3P97386 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lig3P97386 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lig3P97386 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Lig3P97386 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Lig3P97386 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.74□□□□□ -0.05
Lig3P97386 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lig3P97386 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lig3P97386 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lig3P97386 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lig3P97386 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lig3P97386 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lig3P97386 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lig3P97386 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lig3P97386 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lig3P97386 Gm8749-201ENSMUST00000117737 331 ntBASIC14.74□□□□□ -0.05
Lig3P97386 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lig3P97386 Mir3102-201ENSMUST00000175555 104 ntBASIC14.74□□□□□ -0.05
Lig3P97386 Gm27486-201ENSMUST00000184923 80 ntBASIC14.74□□□□□ -0.05
Lig3P97386 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lig3P97386 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lig3P97386 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lig3P97386 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.74□□□□□ -0.05
Lig3P97386 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.74□□□□□ -0.05
Lig3P97386 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lig3P97386 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lig3P97386 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Lig3P97386 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lig3P97386 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lig3P97386 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lig3P97386 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lig3P97386 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lig3P97386 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lig3P97386 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.74□□□□□ -0.05
Lig3P97386 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lig3P97386 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Lig3P97386 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.73□□□□□ -0.05
Lig3P97386 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lig3P97386 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lig3P97386 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Lig3P97386 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Lig3P97386 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lig3P97386 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lig3P97386 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lig3P97386 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lig3P97386 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Lig3P97386 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.73□□□□□ -0.05
Lig3P97386 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Lig3P97386 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lig3P97386 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Lig3P97386 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
Lig3P97386 Gm14660-201ENSMUST00000119809 575 ntBASIC14.73□□□□□ -0.05
Lig3P97386 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Lig3P97386 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Lig3P97386 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.73□□□□□ -0.05
Lig3P97386 Gm2451-201ENSMUST00000199447 999 ntBASIC14.73□□□□□ -0.05
Lig3P97386 Gm10290-201ENSMUST00000200451 999 ntBASIC14.73□□□□□ -0.05
Lig3P97386 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Lig3P97386 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms