Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC16.81■□□□□ 0.28
Nkx2-3P97334 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-3P97334 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Nkx2-3P97334 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-3P97334 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-3P97334 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-3P97334 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.81■□□□□ 0.28
Nkx2-3P97334 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-3P97334 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC16.81■□□□□ 0.28
Nkx2-3P97334 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-3P97334 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-3P97334 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-3P97334 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nkx2-3P97334 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-3P97334 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-3P97334 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-3P97334 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-3P97334 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Nkx2-3P97334 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.8■□□□□ 0.28
Nkx2-3P97334 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-3P97334 Gm5466-201ENSMUST00000119395 1890 ntBASIC16.8■□□□□ 0.28
Nkx2-3P97334 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-3P97334 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Nkx2-3P97334 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-3P97334 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-3P97334 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC16.8■□□□□ 0.28
Nkx2-3P97334 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-3P97334 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Nkx2-3P97334 Gm37489-201ENSMUST00000191883 159 ntBASIC16.8■□□□□ 0.28
Nkx2-3P97334 Gm37466-201ENSMUST00000195692 652 ntBASIC16.8■□□□□ 0.28
Nkx2-3P97334 Gm21769-201ENSMUST00000211922 111 ntBASIC16.8■□□□□ 0.28
Nkx2-3P97334 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-3P97334 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-3P97334 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-3P97334 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-3P97334 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-3P97334 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-3P97334 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-3P97334 AC154725.1-201ENSMUST00000224826 1961 ntBASIC16.8■□□□□ 0.28
Nkx2-3P97334 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Nkx2-3P97334 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-3P97334 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.8■□□□□ 0.28
Nkx2-3P97334 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-3P97334 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-3P97334 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-3P97334 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-3P97334 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-3P97334 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-3P97334 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-3P97334 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-3P97334 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-3P97334 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-3P97334 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.79■□□□□ 0.28
Nkx2-3P97334 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-3P97334 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-3P97334 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-3P97334 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-3P97334 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-3P97334 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-3P97334 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Nkx2-3P97334 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC16.79■□□□□ 0.28
Nkx2-3P97334 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-3P97334 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-3P97334 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC16.79■□□□□ 0.28
Nkx2-3P97334 AC132317.1-201ENSMUST00000227227 962 ntBASIC16.79■□□□□ 0.28
Nkx2-3P97334 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Nkx2-3P97334 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-3P97334 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-3P97334 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-3P97334 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-3P97334 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-3P97334 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-3P97334 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-3P97334 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-3P97334 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-3P97334 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-3P97334 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-3P97334 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-3P97334 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-3P97334 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-3P97334 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-3P97334 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-3P97334 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-3P97334 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-3P97334 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-3P97334 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Nkx2-3P97334 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC16.78■□□□□ 0.28
Nkx2-3P97334 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-3P97334 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC16.78■□□□□ 0.28
Nkx2-3P97334 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-3P97334 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-3P97334 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC16.78■□□□□ 0.28
Nkx2-3P97334 Gm8176-201ENSMUST00000191297 1099 ntBASIC16.78■□□□□ 0.28
Nkx2-3P97334 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-3P97334 Gm9176-201ENSMUST00000219955 1120 ntBASIC16.78■□□□□ 0.28
Nkx2-3P97334 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-3P97334 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-3P97334 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-3P97334 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-3P97334 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms