Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.87□□□□□ -0.51
Hist1h3bP84228 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist1h3bP84228 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hist1h3bP84228 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Gm24694-201ENSMUST00000180054 110 ntBASIC11.87□□□□□ -0.51
Hist1h3bP84228 Gm27663-201ENSMUST00000184839 110 ntBASIC11.87□□□□□ -0.51
Hist1h3bP84228 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hist1h3bP84228 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.87□□□□□ -0.51
Hist1h3bP84228 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.87□□□□□ -0.51
Hist1h3bP84228 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.87□□□□□ -0.51
Hist1h3bP84228 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.86□□□□□ -0.51
Hist1h3bP84228 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.86□□□□□ -0.51
Hist1h3bP84228 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.86□□□□□ -0.51
Hist1h3bP84228 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Gm20445-201ENSMUST00000061905 565 ntBASIC11.86□□□□□ -0.51
Hist1h3bP84228 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.86□□□□□ -0.51
Hist1h3bP84228 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hist1h3bP84228 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.86□□□□□ -0.51
Hist1h3bP84228 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hist1h3bP84228 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hist1h3bP84228 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hist1h3bP84228 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hist1h3bP84228 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms