Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.32□□□□□ -0.28
Shox2P70390 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Shox2P70390 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Shox2P70390 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Shox2P70390 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shox2P70390 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Shox2P70390 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shox2P70390 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shox2P70390 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shox2P70390 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Shox2P70390 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Shox2P70390 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shox2P70390 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.31□□□□□ -0.28
Shox2P70390 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.31□□□□□ -0.28
Shox2P70390 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.31□□□□□ -0.28
Shox2P70390 Gm6376-201ENSMUST00000209407 580 ntBASIC13.31□□□□□ -0.28
Shox2P70390 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.31□□□□□ -0.28
Shox2P70390 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Shox2P70390 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shox2P70390 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shox2P70390 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shox2P70390 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Shox2P70390 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shox2P70390 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Shox2P70390 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.31□□□□□ -0.28
Shox2P70390 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Shox2P70390 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Shox2P70390 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shox2P70390 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shox2P70390 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Shox2P70390 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.3□□□□□ -0.28
Shox2P70390 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.3□□□□□ -0.28
Shox2P70390 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.3□□□□□ -0.28
Shox2P70390 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Shox2P70390 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.3□□□□□ -0.28
Shox2P70390 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.3□□□□□ -0.28
Shox2P70390 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.3□□□□□ -0.28
Shox2P70390 Gm5364-201ENSMUST00000216789 889 ntBASIC13.3□□□□□ -0.28
Shox2P70390 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.3□□□□□ -0.28
Shox2P70390 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Shox2P70390 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Shox2P70390 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Shox2P70390 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.3□□□□□ -0.28
Shox2P70390 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shox2P70390 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.29□□□□□ -0.28
Shox2P70390 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.29□□□□□ -0.28
Shox2P70390 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shox2P70390 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.29□□□□□ -0.28
Shox2P70390 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shox2P70390 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shox2P70390 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shox2P70390 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shox2P70390 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shox2P70390 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shox2P70390 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.29□□□□□ -0.28
Shox2P70390 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shox2P70390 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shox2P70390 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.29□□□□□ -0.28
Shox2P70390 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Shox2P70390 Rps4l-201ENSMUST00000071745 943 ntBASIC13.29□□□□□ -0.28
Shox2P70390 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.29□□□□□ -0.28
Shox2P70390 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shox2P70390 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.29□□□□□ -0.28
Shox2P70390 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shox2P70390 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shox2P70390 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms