Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Rps28P62858 AC127302.2-201ENSMUST00000215212 268 ntBASIC7.81□□□□□ -1.16
Rps28P62858 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rps28P62858 Gm5053-201ENSMUST00000208361 1678 ntBASIC7.81□□□□□ -1.16
Rps28P62858 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rps28P62858 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rps28P62858 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rps28P62858 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rps28P62858 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rps28P62858 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rps28P62858 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Rps28P62858 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rps28P62858 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC7.81□□□□□ -1.16
Rps28P62858 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Rps28P62858 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
Rps28P62858 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rps28P62858 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rps28P62858 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rps28P62858 Gm45161-201ENSMUST00000207316 2263 ntBASIC7.81□□□□□ -1.16
Rps28P62858 Gm10654-201ENSMUST00000098653 1633 ntBASIC7.81□□□□□ -1.16
Rps28P62858 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rps28P62858 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Rps28P62858 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC7.81□□□□□ -1.16
Rps28P62858 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rps28P62858 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rps28P62858 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rps28P62858 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Rps28P62858 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rps28P62858 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Rps28P62858 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Rps28P62858 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rps28P62858 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rps28P62858 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rps28P62858 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rps28P62858 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC7.8□□□□□ -1.16
Rps28P62858 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Slc25a45-201ENSMUST00000025732 2480 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Rps28P62858 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Rps28P62858 Gm10129-202ENSMUST00000193100 1316 ntBASIC7.8□□□□□ -1.16
Rps28P62858 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC7.8□□□□□ -1.16
Rps28P62858 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Rps28P62858 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC7.8□□□□□ -1.16
Rps28P62858 Prdm1-204ENSMUST00000218369 2517 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Rps28P62858 Gm37962-201ENSMUST00000195535 2034 ntBASIC7.8□□□□□ -1.16
Rps28P62858 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC7.8□□□□□ -1.16
Rps28P62858 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Gm8770-201ENSMUST00000121113 1109 ntBASIC7.8□□□□□ -1.16
Rps28P62858 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Gm43353-201ENSMUST00000199224 1295 ntBASIC7.8□□□□□ -1.16
Rps28P62858 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC7.8□□□□□ -1.16
Rps28P62858 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC7.8□□□□□ -1.16
Rps28P62858 AC126408.1-201ENSMUST00000225184 523 ntBASIC7.8□□□□□ -1.16
Rps28P62858 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Rps28P62858 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
Rps28P62858 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Rps28P62858 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC7.8□□□□□ -1.16
Rps28P62858 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Rps28P62858 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Rps28P62858 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC7.8□□□□□ -1.16
Rps28P62858 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC7.8□□□□□ -1.16
Rps28P62858 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Rps28P62858 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC7.8□□□□□ -1.16
Rps28P62858 Sh2d7-201ENSMUST00000060242 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Rps28P62858 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Rps28P62858 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Rps28P62858 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Rps28P62858 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC7.8□□□□□ -1.16
Rps28P62858 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Rps28P62858 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Rps28P62858 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Rps28P62858 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Rps28P62858 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms