Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm5P62322 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm5P62322 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm5P62322 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm5P62322 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm5P62322 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm5P62322 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm5P62322 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Lsm5P62322 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lsm5P62322 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.22□□□□□ -0.61
Lsm5P62322 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.22□□□□□ -0.61
Lsm5P62322 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm5P62322 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm5P62322 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm5P62322 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm5P62322 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm5P62322 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.21□□□□□ -0.61
Lsm5P62322 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Lsm5P62322 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm5P62322 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm5P62322 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Lsm5P62322 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm5P62322 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.21□□□□□ -0.61
Lsm5P62322 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm5P62322 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm5P62322 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Lsm5P62322 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm5P62322 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm5P62322 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm5P62322 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Lsm5P62322 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.21□□□□□ -0.61
Lsm5P62322 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm5P62322 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lsm5P62322 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lsm5P62322 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lsm5P62322 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lsm5P62322 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lsm5P62322 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lsm5P62322 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Lsm5P62322 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.62
Lsm5P62322 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Lsm5P62322 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lsm5P62322 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lsm5P62322 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Lsm5P62322 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.2□□□□□ -0.62
Lsm5P62322 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Lsm5P62322 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Lsm5P62322 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 Gm5177-201ENSMUST00000183092 997 ntBASIC11.2□□□□□ -0.62
Lsm5P62322 Gm27459-201ENSMUST00000184860 107 ntBASIC11.2□□□□□ -0.62
Lsm5P62322 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Lsm5P62322 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Lsm5P62322 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Lsm5P62322 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Lsm5P62322 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.2□□□□□ -0.62
Lsm5P62322 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm5P62322 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.19□□□□□ -0.62
Lsm5P62322 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm5P62322 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Lsm5P62322 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm5P62322 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm5P62322 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm5P62322 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm5P62322 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm5P62322 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Lsm5P62322 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.19□□□□□ -0.62
Lsm5P62322 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm5P62322 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm5P62322 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm5P62322 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.19□□□□□ -0.62
Lsm5P62322 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm5P62322 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms