Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.91□□□□□ -0.5
Sec61a1P61620 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Sec61a1P61620 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.91□□□□□ -0.5
Sec61a1P61620 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.91□□□□□ -0.5
Sec61a1P61620 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a1P61620 Gm6222-201ENSMUST00000120787 396 ntBASIC11.91□□□□□ -0.5
Sec61a1P61620 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.91□□□□□ -0.5
Sec61a1P61620 Gm25144-201ENSMUST00000179561 110 ntBASIC11.91□□□□□ -0.5
Sec61a1P61620 Gm25352-201ENSMUST00000179815 110 ntBASIC11.91□□□□□ -0.5
Sec61a1P61620 Gm27321-201ENSMUST00000185021 205 ntBASIC11.91□□□□□ -0.5
Sec61a1P61620 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.91□□□□□ -0.5
Sec61a1P61620 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.91□□□□□ -0.5
Sec61a1P61620 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.91□□□□□ -0.5
Sec61a1P61620 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a1P61620 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a1P61620 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a1P61620 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a1P61620 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a1P61620 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.91□□□□□ -0.5
Sec61a1P61620 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.91□□□□□ -0.5
Sec61a1P61620 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a1P61620 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a1P61620 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.91□□□□□ -0.5
Sec61a1P61620 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sec61a1P61620 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a1P61620 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a1P61620 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Sec61a1P61620 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a1P61620 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a1P61620 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a1P61620 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a1P61620 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a1P61620 Gm5566-201ENSMUST00000116118 459 ntBASIC11.9□□□□□ -0.5
Sec61a1P61620 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a1P61620 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.9□□□□□ -0.5
Sec61a1P61620 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.9□□□□□ -0.5
Sec61a1P61620 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a1P61620 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a1P61620 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a1P61620 Gm27989-201ENSMUST00000184721 107 ntBASIC11.9□□□□□ -0.5
Sec61a1P61620 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a1P61620 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a1P61620 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a1P61620 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.9□□□□□ -0.5
Sec61a1P61620 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a1P61620 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.9□□□□□ -0.5
Sec61a1P61620 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a1P61620 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Sec61a1P61620 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a1P61620 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a1P61620 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a1P61620 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a1P61620 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a1P61620 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.9□□□□□ -0.5
Sec61a1P61620 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sec61a1P61620 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.9□□□□□ -0.5
Sec61a1P61620 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Sec61a1P61620 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Sec61a1P61620 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sec61a1P61620 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.89□□□□□ -0.51
Sec61a1P61620 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Mir1897-201ENSMUST00000122581 272 ntBASIC11.89□□□□□ -0.51
Sec61a1P61620 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Gm27306-201ENSMUST00000183970 107 ntBASIC11.89□□□□□ -0.51
Sec61a1P61620 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Gm44344-201ENSMUST00000200287 129 ntBASIC11.89□□□□□ -0.51
Sec61a1P61620 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sec61a1P61620 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Sec61a1P61620 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sec61a1P61620 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sec61a1P61620 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sec61a1P61620 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a1P61620 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a1P61620 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a1P61620 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sec61a1P61620 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms