Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.97□□□□□ -0.49
Sf3b6P59708 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3b6P59708 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3b6P59708 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3b6P59708 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3b6P59708 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3b6P59708 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.97□□□□□ -0.49
Sf3b6P59708 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Sf3b6P59708 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Sf3b6P59708 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.97□□□□□ -0.49
Sf3b6P59708 Gm14701-201ENSMUST00000117156 348 ntBASIC11.97□□□□□ -0.49
Sf3b6P59708 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.97□□□□□ -0.49
Sf3b6P59708 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.97□□□□□ -0.49
Sf3b6P59708 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.97□□□□□ -0.49
Sf3b6P59708 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.97□□□□□ -0.49
Sf3b6P59708 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.97□□□□□ -0.49
Sf3b6P59708 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.97□□□□□ -0.49
Sf3b6P59708 Mir6990-201ENSMUST00000183724 91 ntBASIC11.97□□□□□ -0.49
Sf3b6P59708 Gm44335-201ENSMUST00000196879 141 ntBASIC11.97□□□□□ -0.49
Sf3b6P59708 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3b6P59708 Gm44297-201ENSMUST00000198304 141 ntBASIC11.97□□□□□ -0.49
Sf3b6P59708 Gm44346-201ENSMUST00000198851 141 ntBASIC11.97□□□□□ -0.49
Sf3b6P59708 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.97□□□□□ -0.49
Sf3b6P59708 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.97□□□□□ -0.49
Sf3b6P59708 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.97□□□□□ -0.49
Sf3b6P59708 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.97□□□□□ -0.49
Sf3b6P59708 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Sf3b6P59708 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Sf3b6P59708 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3b6P59708 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3b6P59708 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3b6P59708 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.97□□□□□ -0.49
Sf3b6P59708 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3b6P59708 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3b6P59708 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3b6P59708 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sf3b6P59708 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.97□□□□□ -0.49
Sf3b6P59708 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3b6P59708 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Sf3b6P59708 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3b6P59708 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3b6P59708 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sf3b6P59708 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Sf3b6P59708 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 Pck2-205ENSMUST00000226352 2784 ntBASIC11.96□□□□□ -0.49
Sf3b6P59708 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.96□□□□□ -0.49
Sf3b6P59708 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Sf3b6P59708 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Sf3b6P59708 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.96□□□□□ -0.49
Sf3b6P59708 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC11.96□□□□□ -0.49
Sf3b6P59708 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.96□□□□□ -0.49
Sf3b6P59708 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.96□□□□□ -0.49
Sf3b6P59708 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.96□□□□□ -0.49
Sf3b6P59708 Gm20614-201ENSMUST00000177106 632 ntBASIC11.96□□□□□ -0.49
Sf3b6P59708 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Sf3b6P59708 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Sf3b6P59708 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 Gm8396-201ENSMUST00000057361 823 ntBASIC11.96□□□□□ -0.49
Sf3b6P59708 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Sf3b6P59708 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Sf3b6P59708 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sf3b6P59708 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sf3b6P59708 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.96□□□□□ -0.5
Sf3b6P59708 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sf3b6P59708 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sf3b6P59708 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sf3b6P59708 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Sf3b6P59708 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.96□□□□□ -0.5
Sf3b6P59708 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sf3b6P59708 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Sf3b6P59708 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sf3b6P59708 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.5
Sf3b6P59708 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sf3b6P59708 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sf3b6P59708 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sf3b6P59708 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms