Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Nup43P59235 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup43P59235 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nup43P59235 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup43P59235 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup43P59235 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nup43P59235 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup43P59235 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup43P59235 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup43P59235 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup43P59235 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup43P59235 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nup43P59235 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.74□□□□□ -0.37
Nup43P59235 Gm13689-201ENSMUST00000119360 685 ntBASIC12.74□□□□□ -0.37
Nup43P59235 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Nup43P59235 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nup43P59235 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.74□□□□□ -0.37
Nup43P59235 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.74□□□□□ -0.37
Nup43P59235 Gm38144-201ENSMUST00000192790 465 ntBASIC12.74□□□□□ -0.37
Nup43P59235 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nup43P59235 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.74□□□□□ -0.37
Nup43P59235 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.74□□□□□ -0.37
Nup43P59235 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup43P59235 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nup43P59235 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup43P59235 Gm6180-201ENSMUST00000065243 498 ntBASIC12.74□□□□□ -0.37
Nup43P59235 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup43P59235 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nup43P59235 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup43P59235 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup43P59235 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nup43P59235 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Nup43P59235 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nup43P59235 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nup43P59235 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nup43P59235 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup43P59235 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup43P59235 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup43P59235 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup43P59235 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup43P59235 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.73□□□□□ -0.37
Nup43P59235 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup43P59235 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup43P59235 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nup43P59235 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.73□□□□□ -0.37
Nup43P59235 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup43P59235 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Nup43P59235 Gm15371-201ENSMUST00000117057 784 ntBASIC12.73□□□□□ -0.37
Nup43P59235 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.73□□□□□ -0.37
Nup43P59235 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.73□□□□□ -0.37
Nup43P59235 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.73□□□□□ -0.37
Nup43P59235 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nup43P59235 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.73□□□□□ -0.37
Nup43P59235 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.73□□□□□ -0.37
Nup43P59235 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup43P59235 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup43P59235 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.73□□□□□ -0.37
Nup43P59235 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup43P59235 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Nup43P59235 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Nup43P59235 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup43P59235 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nup43P59235 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nup43P59235 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nup43P59235 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup43P59235 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup43P59235 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup43P59235 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup43P59235 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup43P59235 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup43P59235 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nup43P59235 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup43P59235 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nup43P59235 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup43P59235 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Nup43P59235 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.72□□□□□ -0.37
Nup43P59235 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Nup43P59235 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Nup43P59235 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.72□□□□□ -0.37
Nup43P59235 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup43P59235 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup43P59235 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nup43P59235 Gm11434-201ENSMUST00000122379 629 ntBASIC12.72□□□□□ -0.37
Nup43P59235 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.72□□□□□ -0.37
Nup43P59235 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup43P59235 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nup43P59235 Gm7063-201ENSMUST00000186840 981 ntBASIC12.72□□□□□ -0.37
Nup43P59235 Gm6745-201ENSMUST00000199216 526 ntBASIC12.72□□□□□ -0.37
Nup43P59235 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Nup43P59235 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Nup43P59235 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup43P59235 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup43P59235 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup43P59235 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup43P59235 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup43P59235 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup43P59235 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.72□□□□□ -0.37
Nup43P59235 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup43P59235 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup43P59235 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms