Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Lim2P56563 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lim2P56563 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lim2P56563 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lim2P56563 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lim2P56563 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Lim2P56563 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lim2P56563 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Lim2P56563 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Lim2P56563 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lim2P56563 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lim2P56563 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lim2P56563 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lim2P56563 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lim2P56563 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lim2P56563 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lim2P56563 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Lim2P56563 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lim2P56563 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Lim2P56563 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lim2P56563 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lim2P56563 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Lim2P56563 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lim2P56563 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lim2P56563 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lim2P56563 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lim2P56563 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.48□□□□□ -0.25
Lim2P56563 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lim2P56563 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lim2P56563 Gm11918-201ENSMUST00000121660 179 ntBASIC13.48□□□□□ -0.25
Lim2P56563 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lim2P56563 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lim2P56563 Gm45384-201ENSMUST00000210451 277 ntBASIC13.48□□□□□ -0.25
Lim2P56563 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.48□□□□□ -0.25
Lim2P56563 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lim2P56563 Gm5161-201ENSMUST00000075243 853 ntBASIC13.48□□□□□ -0.25
Lim2P56563 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lim2P56563 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lim2P56563 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lim2P56563 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Lim2P56563 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lim2P56563 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lim2P56563 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.48□□□□□ -0.25
Lim2P56563 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Lim2P56563 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Lim2P56563 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lim2P56563 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lim2P56563 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lim2P56563 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lim2P56563 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lim2P56563 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.47□□□□□ -0.25
Lim2P56563 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Lim2P56563 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lim2P56563 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lim2P56563 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lim2P56563 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lim2P56563 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lim2P56563 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lim2P56563 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lim2P56563 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Lim2P56563 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lim2P56563 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Lim2P56563 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Lim2P56563 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.47□□□□□ -0.25
Lim2P56563 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.47□□□□□ -0.25
Lim2P56563 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lim2P56563 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.47□□□□□ -0.25
Lim2P56563 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.47□□□□□ -0.25
Lim2P56563 Gm27701-201ENSMUST00000184498 110 ntBASIC13.47□□□□□ -0.25
Lim2P56563 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.47□□□□□ -0.25
Lim2P56563 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.47□□□□□ -0.25
Lim2P56563 Gm24447-201ENSMUST00000083977 338 ntBASIC13.47□□□□□ -0.25
Lim2P56563 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Lim2P56563 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Lim2P56563 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.47□□□□□ -0.25
Lim2P56563 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lim2P56563 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lim2P56563 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lim2P56563 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lim2P56563 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lim2P56563 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lim2P56563 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lim2P56563 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.46□□□□□ -0.25
Lim2P56563 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lim2P56563 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lim2P56563 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lim2P56563 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Lim2P56563 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lim2P56563 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.46□□□□□ -0.25
Lim2P56563 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lim2P56563 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lim2P56563 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lim2P56563 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lim2P56563 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lim2P56563 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lim2P56563 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.46□□□□□ -0.25
Lim2P56563 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lim2P56563 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lim2P56563 Gm28911-201ENSMUST00000188837 117 ntBASIC13.46□□□□□ -0.25
Lim2P56563 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms