Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.64□□□□□ -0.23
Lhx3P50481 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.64□□□□□ -0.23
Lhx3P50481 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.64□□□□□ -0.23
Lhx3P50481 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx3P50481 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx3P50481 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx3P50481 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx3P50481 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.64□□□□□ -0.23
Lhx3P50481 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.64□□□□□ -0.23
Lhx3P50481 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx3P50481 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx3P50481 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Lhx3P50481 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Lhx3P50481 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx3P50481 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx3P50481 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Lhx3P50481 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx3P50481 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx3P50481 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.63□□□□□ -0.23
Lhx3P50481 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx3P50481 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.63□□□□□ -0.23
Lhx3P50481 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx3P50481 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx3P50481 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx3P50481 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Lhx3P50481 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.63□□□□□ -0.23
Lhx3P50481 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.63□□□□□ -0.23
Lhx3P50481 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.63□□□□□ -0.23
Lhx3P50481 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.63□□□□□ -0.23
Lhx3P50481 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.63□□□□□ -0.23
Lhx3P50481 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.63□□□□□ -0.23
Lhx3P50481 Gm18187-201ENSMUST00000196476 984 ntBASIC13.63□□□□□ -0.23
Lhx3P50481 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.63□□□□□ -0.23
Lhx3P50481 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx3P50481 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx3P50481 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx3P50481 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Lhx3P50481 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx3P50481 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx3P50481 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx3P50481 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx3P50481 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx3P50481 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx3P50481 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.63□□□□□ -0.23
Lhx3P50481 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx3P50481 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Lhx3P50481 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx3P50481 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx3P50481 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx3P50481 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx3P50481 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx3P50481 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx3P50481 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx3P50481 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx3P50481 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx3P50481 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx3P50481 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx3P50481 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx3P50481 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.62□□□□□ -0.23
Lhx3P50481 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx3P50481 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx3P50481 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx3P50481 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx3P50481 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx3P50481 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx3P50481 Gm10156-201ENSMUST00000122364 462 ntBASIC13.62□□□□□ -0.23
Lhx3P50481 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx3P50481 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.62□□□□□ -0.23
Lhx3P50481 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx3P50481 Gm8810-201ENSMUST00000172895 754 ntBASIC13.62□□□□□ -0.23
Lhx3P50481 Gm45841-201ENSMUST00000207700 164 ntBASIC13.62□□□□□ -0.23
Lhx3P50481 Gm7561-201ENSMUST00000211203 886 ntBASIC13.62□□□□□ -0.23
Lhx3P50481 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.62□□□□□ -0.23
Lhx3P50481 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Lhx3P50481 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.62□□□□□ -0.23
Lhx3P50481 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Lhx3P50481 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Lhx3P50481 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Lhx3P50481 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx3P50481 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx3P50481 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.62□□□□□ -0.23
Lhx3P50481 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Lhx3P50481 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx3P50481 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx3P50481 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx3P50481 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.62□□□□□ -0.23
Lhx3P50481 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.62□□□□□ -0.23
Lhx3P50481 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Lhx3P50481 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx3P50481 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx3P50481 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx3P50481 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx3P50481 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.61□□□□□ -0.23
Lhx3P50481 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx3P50481 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.61□□□□□ -0.23
Lhx3P50481 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx3P50481 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx3P50481 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx3P50481 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.61□□□□□ -0.23
Lhx3P50481 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms