Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SftpbP50405 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SftpbP50405 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SftpbP50405 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
SftpbP50405 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SftpbP50405 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SftpbP50405 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SftpbP50405 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SftpbP50405 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SftpbP50405 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SftpbP50405 Gm15393-201ENSMUST00000120499 219 ntBASIC13.81□□□□□ -0.2
SftpbP50405 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SftpbP50405 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.81□□□□□ -0.2
SftpbP50405 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SftpbP50405 Gm2756-201ENSMUST00000195851 400 ntBASIC13.81□□□□□ -0.2
SftpbP50405 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.81□□□□□ -0.2
SftpbP50405 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.81□□□□□ -0.2
SftpbP50405 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
SftpbP50405 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SftpbP50405 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
SftpbP50405 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.81□□□□□ -0.2
SftpbP50405 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.81□□□□□ -0.2
SftpbP50405 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SftpbP50405 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SftpbP50405 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SftpbP50405 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SftpbP50405 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SftpbP50405 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SftpbP50405 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SftpbP50405 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SftpbP50405 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SftpbP50405 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SftpbP50405 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SftpbP50405 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SftpbP50405 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SftpbP50405 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.8□□□□□ -0.2
SftpbP50405 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SftpbP50405 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SftpbP50405 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SftpbP50405 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SftpbP50405 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SftpbP50405 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SftpbP50405 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SftpbP50405 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SftpbP50405 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SftpbP50405 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.8□□□□□ -0.2
SftpbP50405 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SftpbP50405 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.8□□□□□ -0.2
SftpbP50405 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.8□□□□□ -0.2
SftpbP50405 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SftpbP50405 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SftpbP50405 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.8□□□□□ -0.2
SftpbP50405 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.8□□□□□ -0.2
SftpbP50405 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.8□□□□□ -0.2
SftpbP50405 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SftpbP50405 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SftpbP50405 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SftpbP50405 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SftpbP50405 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SftpbP50405 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.8□□□□□ -0.2
SftpbP50405 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SftpbP50405 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SftpbP50405 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SftpbP50405 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SftpbP50405 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SftpbP50405 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SftpbP50405 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SftpbP50405 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SftpbP50405 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
SftpbP50405 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SftpbP50405 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SftpbP50405 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SftpbP50405 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SftpbP50405 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SftpbP50405 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SftpbP50405 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SftpbP50405 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SftpbP50405 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SftpbP50405 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.79□□□□□ -0.2
SftpbP50405 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SftpbP50405 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SftpbP50405 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SftpbP50405 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SftpbP50405 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.79□□□□□ -0.2
SftpbP50405 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SftpbP50405 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SftpbP50405 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SftpbP50405 Gm25948-201ENSMUST00000175334 112 ntBASIC13.79□□□□□ -0.2
SftpbP50405 Gm27702-201ENSMUST00000184512 56 ntBASIC13.79□□□□□ -0.2
SftpbP50405 Gm38294-201ENSMUST00000192831 381 ntBASIC13.79□□□□□ -0.2
SftpbP50405 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SftpbP50405 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.79□□□□□ -0.2
SftpbP50405 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.79□□□□□ -0.2
SftpbP50405 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SftpbP50405 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SftpbP50405 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SftpbP50405 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SftpbP50405 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.79□□□□□ -0.2
SftpbP50405 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SftpbP50405 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms