Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SftpdP50404 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SftpdP50404 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.14
SftpdP50404 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SftpdP50404 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SftpdP50404 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SftpdP50404 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SftpdP50404 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SftpdP50404 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SftpdP50404 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SftpdP50404 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.2□□□□□ -0.14
SftpdP50404 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SftpdP50404 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SftpdP50404 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SftpdP50404 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SftpdP50404 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SftpdP50404 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SftpdP50404 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.2□□□□□ -0.14
SftpdP50404 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SftpdP50404 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SftpdP50404 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
SftpdP50404 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SftpdP50404 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.2□□□□□ -0.14
SftpdP50404 Gm38144-201ENSMUST00000192790 465 ntBASIC14.2□□□□□ -0.14
SftpdP50404 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SftpdP50404 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SftpdP50404 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.2□□□□□ -0.14
SftpdP50404 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.2□□□□□ -0.14
SftpdP50404 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SftpdP50404 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SftpdP50404 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.2□□□□□ -0.14
SftpdP50404 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SftpdP50404 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SftpdP50404 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SftpdP50404 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SftpdP50404 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
SftpdP50404 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SftpdP50404 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SftpdP50404 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SftpdP50404 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SftpdP50404 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SftpdP50404 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
SftpdP50404 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SftpdP50404 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SftpdP50404 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SftpdP50404 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SftpdP50404 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SftpdP50404 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SftpdP50404 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SftpdP50404 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.19□□□□□ -0.14
SftpdP50404 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.19□□□□□ -0.14
SftpdP50404 Mir7654-201ENSMUST00000185082 70 ntBASIC14.19□□□□□ -0.14
SftpdP50404 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.19□□□□□ -0.14
SftpdP50404 Gm29608-201ENSMUST00000190444 463 ntBASIC14.19□□□□□ -0.14
SftpdP50404 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SftpdP50404 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SftpdP50404 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SftpdP50404 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SftpdP50404 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SftpdP50404 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SftpdP50404 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SftpdP50404 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SftpdP50404 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SftpdP50404 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SftpdP50404 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SftpdP50404 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SftpdP50404 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.19□□□□□ -0.14
SftpdP50404 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SftpdP50404 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SftpdP50404 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.18□□□□□ -0.14
SftpdP50404 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SftpdP50404 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
SftpdP50404 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SftpdP50404 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SftpdP50404 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SftpdP50404 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SftpdP50404 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SftpdP50404 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SftpdP50404 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SftpdP50404 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SftpdP50404 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
SftpdP50404 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SftpdP50404 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SftpdP50404 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.18□□□□□ -0.14
SftpdP50404 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.18□□□□□ -0.14
SftpdP50404 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SftpdP50404 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.18□□□□□ -0.14
SftpdP50404 Gm42550-201ENSMUST00000201553 960 ntBASIC14.18□□□□□ -0.14
SftpdP50404 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SftpdP50404 Gm45668-201ENSMUST00000211271 493 ntBASIC14.18□□□□□ -0.14
SftpdP50404 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.18□□□□□ -0.14
SftpdP50404 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
SftpdP50404 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SftpdP50404 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SftpdP50404 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SftpdP50404 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SftpdP50404 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SftpdP50404 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.18□□□□□ -0.14
SftpdP50404 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SftpdP50404 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms